Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 8.3e-114 413.7 205 100.0
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 4.9e-74 281.6 205 72.2
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 5.8e-67 258.1 206 67.0
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 2.3e-63 246.1 208 62.5
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 1.1e-60 237.3 212 64.2
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 2.0e-59 233.0 230 58.7
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 2.2e-58 229.6 214 64.0
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 2.9e-58 229.2 240 55.8
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 8.5e-58 227.6 210 62.4
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 1.9e-57 226.5 223 61.9
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 3.2e-57 225.7 214 60.3
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 9.3e-57 224.2 204 61.3
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 1.6e-56 223.4 217 59.9
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 3.6e-56 222.2 205 62.0
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 3.9e-55 218.8 221 59.7
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 1.1e-54 217.2 222 57.2
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 6.3e-53 211.5 221 58.4
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 8.2e-53 211.1 221 58.4
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.0e-50 204.1 214 58.9
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.2e-50 203.0 213 59.2
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 2.5e-49 199.5 221 56.1
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 5.5e-49 198.4 215 55.3
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 5.5e-49 198.4 217 55.3
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 2.1e-48 196.4 220 52.7
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 4.6e-48 195.3 221 57.0
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 6.1e-48 194.9 220 51.8
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 2.3e-47 193.0 218 54.6
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.9e-47 192.2 218 56.0
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 5.1e-47 191.8 216 54.2
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 6.7e-47 191.4 207 51.7
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 8.8e-47 191.0 215 54.0
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 1.5e-46 190.3 220 51.8
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 3.3e-46 189.1 216 52.8
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 9.7e-46 187.6 214 54.2
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 9.7e-46 187.6 216 53.7
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 1.3e-45 187.2 213 53.5
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.3e-45 187.2 218 55.0
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 1.7e-45 186.8 225 55.1
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.7e-45 186.8 218 55.0
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.7e-45 186.8 219 55.3
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 2.8e-45 186.0 212 53.8
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 2.8e-45 186.0 223 50.7
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 4.8e-45 185.3 223 55.2
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 1.8e-44 183.3 222 54.1
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 2.4e-44 183.0 225 52.4
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.4e-44 183.0 224 54.0
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 3.1e-44 182.6 213 52.1
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 5.3e-44 181.8 224 53.6
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 9.1e-44 181.0 225 52.0
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.2e-43 180.6 213 56.8
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.2e-43 180.6 219 50.2
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.5e-43 180.3 211 53.1
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.5e-43 180.3 227 49.3
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 2.0e-43 179.9 227 51.5
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.0e-43 179.9 209 55.5
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 2.6e-43 179.5 225 53.3
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 4.5e-43 178.7 228 52.6
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 1.7e-42 176.8 224 50.4
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.7e-42 176.8 214 53.3
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.2e-42 176.4 213 50.2
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.8e-42 175.6 211 51.2
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 6.5e-42 174.9 217 52.5
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 6.5e-42 174.9 219 49.3
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 8.5e-42 174.5 212 52.8
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.1e-41 174.1 212 52.4
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.1e-41 174.1 213 49.8
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.9e-41 173.3 218 50.5
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 4.2e-41 172.2 211 50.7
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 4.2e-41 172.2 215 50.2
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 4.2e-41 172.2 215 50.2
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 5.5e-41 171.8 214 54.2
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 7.2e-41 171.4 212 52.4
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 9.4e-41 171.0 205 53.2
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 1.2e-40 170.6 219 51.6
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 2.1e-40 169.9 216 49.1
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 2.7e-40 169.5 210 51.0
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 4.7e-40 168.7 221 52.5
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 4.7e-40 168.7 213 52.1
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 7.9e-40 167.9 209 49.8
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 1.8e-39 166.8 207 51.7
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.0e-39 166.0 214 49.1
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 5.2e-39 165.2 164 54.9
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 8.8e-39 164.5 217 53.5
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 8.8e-39 164.5 210 48.1
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 8.8e-39 164.5 214 50.0
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 8.8e-39 164.5 219 51.1
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 1.1e-38 164.1 222 50.0
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 3.3e-38 162.5 211 50.2
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 3.3e-38 162.5 211 50.7
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 3.3e-38 162.5 214 48.6
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 4.4e-38 162.2 215 49.8
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 4.4e-38 162.2 210 50.0
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 5.7e-38 161.8 218 52.3
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 9.7e-38 161.0 161 59.6
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 1.3e-37 160.6 220 50.5
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.7e-37 160.2 215 50.7
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 3.7e-37 159.1 212 48.1
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.1e-36 157.5 221 48.9
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.8e-36 156.8 180 50.6
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.8e-36 156.8 208 48.6
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 3.1e-36 156.0 177 49.2
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 5.3e-36 155.2 217 47.9
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 7.0e-36 154.8 209 47.4
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 7.0e-36 154.8 208 48.1
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.2e-35 154.1 215 48.4
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.6e-35 152.9 213 46.5
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 5.9e-35 151.8 225 45.8
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 7.7e-35 151.4 210 49.0
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.0e-34 151.0 214 46.7
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.7e-34 150.2 206 49.5
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 2.2e-34 149.8 215 46.5
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.2e-34 149.8 212 45.3
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 6.5e-34 148.3 186 50.5
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 8.5e-34 147.9 214 45.3
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 1.9e-33 146.7 217 46.1
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 4.2e-33 145.6 145 55.2
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 4.2e-33 145.6 199 49.2
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 7.2e-33 144.8 219 47.5
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 7.2e-33 144.8 212 46.2
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 7.2e-33 144.8 215 45.6
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 2.1e-32 143.3 214 43.5
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 2.7e-32 142.9 247 40.9
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 4.7e-32 142.1 217 44.2
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 4.7e-32 142.1 210 46.7
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 1.4e-31 140.6 235 42.6
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 1.8e-31 140.2 216 44.9
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.8e-31 140.2 212 45.3
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 1.8e-31 140.2 221 48.9
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 1.2e-30 137.5 215 43.7
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 3.3e-30 136.0 213 44.6
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.7e-29 133.7 195 46.2
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 8.2e-29 131.3 211 44.5
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.4e-28 130.6 206 44.7
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 9.1e-28 127.9 204 42.6
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 7.7e-27 124.8 204 42.2
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 7.7e-27 124.8 204 42.2
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 1.7e-26 123.6 171 46.8
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 1.7e-26 123.6 205 42.4
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 1.7e-26 123.6 221 44.3
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 2.9e-26 122.9 171 46.8
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 3.2e-25 119.4 87 70.1
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 8.0e-24 114.8 209 42.6
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.0e-23 114.4 202 42.1
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 5.2e-23 112.1 206 40.8
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.2e-22 110.9 280 34.6
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 3.4e-22 109.4 214 38.3
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 5.7e-22 108.6 167 47.3
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 1.8e-20 103.6 199 40.2
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 4.1e-20 102.4 211 40.3
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.7e-18 97.1 147 46.3
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 2.9e-18 96.3 155 43.9
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.8e-18 95.9 155 45.2
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 1.5e-17 94.0 208 38.9
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 1.9e-17 93.6 215 40.0
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 2.1e-16 90.1 196 37.8
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 3.6e-16 89.4 196 37.2
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 5.7e-14 82.0 106 50.0
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 9.8e-14 81.3 84 53.6
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.5e-11 72.8 98 46.9
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 3.8e-10 69.3 102 45.1
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 5.0e-10 68.9 82 51.2
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.3e-09 66.2 133 39.8
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 4.3e-09 65.9 103 44.7
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 1.0e-07 61.2 121 40.5
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 3.0e-07 59.7 56 51.8
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 3.0e-07 59.7 85 45.9
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 4.4e-06 55.8 60 53.3
SEGI_40815 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 5.7e-06 55.5 81 46.9


User provided reference genes

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