Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 9.6e-112 406.8 193 100.0
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 2.9e-76 288.9 187 70.1
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 8.5e-76 287.3 203 69.0
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 1.4e-75 286.6 181 72.9
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.5e-75 285.8 193 68.4
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 3.2e-75 285.4 193 69.4
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 3.2e-75 285.4 176 73.3
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 5.5e-75 284.6 182 70.9
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 3.0e-73 278.9 163 74.8
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 1.1e-72 276.9 183 69.9
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 1.5e-72 276.6 193 67.4
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.5e-72 276.6 173 71.7
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.0e-72 276.2 194 67.0
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 2.0e-72 276.2 174 70.1
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 2.5e-72 275.8 188 67.6
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 4.3e-72 275.0 189 67.7
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 5.7e-72 274.6 191 71.7
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 7.4e-72 274.2 193 66.3
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 6.3e-71 271.2 191 66.5
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 6.3e-71 271.2 189 67.2
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 8.2e-71 270.8 190 65.8
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.4e-70 270.0 189 66.7
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 1.8e-70 269.6 192 65.1
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 1.8e-70 269.6 179 68.7
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 2.4e-70 269.2 189 67.7
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 3.1e-70 268.9 189 65.1
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.1e-70 268.9 182 68.7
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 3.1e-70 268.9 182 68.7
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 4.1e-70 268.5 175 69.1
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 5.3e-70 268.1 210 62.4
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 5.3e-70 268.1 181 67.4
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 5.3e-70 268.1 197 65.5
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 6.9e-70 267.7 189 66.1
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 6.9e-70 267.7 189 66.1
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 9.1e-70 267.3 185 67.0
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 1.2e-69 266.9 188 65.4
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 1.2e-69 266.9 185 66.5
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 3.4e-69 265.4 182 65.9
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 3.4e-69 265.4 189 64.6
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 3.4e-69 265.4 188 64.9
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 5.9e-69 264.6 191 65.4
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 5.9e-69 264.6 203 62.6
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 7.7e-69 264.2 193 65.3
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.0e-68 263.8 183 67.2
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 1.0e-68 263.8 192 65.1
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 1.3e-68 263.5 163 69.3
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.3e-68 263.5 176 67.0
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 1.3e-68 263.5 188 64.9
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.7e-68 263.1 191 62.3
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 2.9e-68 262.3 189 65.6
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 3.8e-68 261.9 188 66.0
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 5.0e-68 261.5 191 64.4
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 5.0e-68 261.5 192 65.1
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 5.0e-68 261.5 188 64.4
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 6.5e-68 261.2 174 69.0
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 8.5e-68 260.8 198 62.1
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 1.1e-67 260.4 176 68.2
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 1.1e-67 260.4 164 70.7
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 1.4e-67 260.0 193 61.1
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 1.4e-67 260.0 189 65.1
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 1.9e-67 259.6 162 72.2
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 1.9e-67 259.6 182 63.7
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 5.5e-67 258.1 178 65.7
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 9.4e-67 257.3 169 68.6
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 2.7e-66 255.8 191 64.4
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 4.7e-66 255.0 164 68.9
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 4.7e-66 255.0 189 63.5
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 1.0e-65 253.8 185 64.9
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 1.8e-65 253.1 163 71.8
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 2.3e-65 252.7 188 63.3
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 3.0e-65 252.3 182 67.6
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 5.1e-65 251.5 163 68.7
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 1.1e-64 250.4 195 60.5
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 1.1e-64 250.4 182 67.0
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 1.5e-64 250.0 187 63.1
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 2.6e-64 249.2 182 65.4
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 2.6e-64 249.2 182 67.0
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 4.4e-64 248.4 182 66.5
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 7.4e-64 247.7 182 66.5
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 1.3e-63 246.9 184 65.2
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 1.3e-63 246.9 184 65.2
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 8.2e-63 244.2 141 75.9
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 8.2e-63 244.2 270 49.6
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 8.2e-63 244.2 175 65.7
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 1.1e-62 243.8 189 62.4
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 1.1e-62 243.8 184 63.6
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 1.8e-62 243.0 194 60.8
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 1.8e-62 243.0 188 58.0
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 2.4e-62 242.7 184 65.2
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 3.1e-62 242.3 187 62.6
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 4.1e-62 241.9 189 60.3
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 7.0e-62 241.1 187 62.6
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 4.5e-61 238.4 188 62.8
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 5.9e-61 238.0 188 61.7
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 5.9e-61 238.0 183 62.8
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 2.9e-60 235.7 188 61.2
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 6.5e-60 234.6 188 60.1
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 8.5e-60 234.2 164 65.9
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 7.2e-59 231.1 187 60.4
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 7.2e-59 231.1 194 60.8
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 4.7e-58 228.4 189 60.3
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 3.0e-57 225.7 234 52.1
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 5.7e-56 221.5 148 69.6
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 1.7e-55 219.9 234 47.9
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 3.7e-55 218.8 163 64.4
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 6.3e-55 218.0 150 67.3
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 2.6e-53 212.6 148 68.2
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 1.0e-52 210.7 139 69.1
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.0e-52 210.7 152 65.8
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 8.5e-52 207.6 151 63.6
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 3.6e-50 202.2 169 56.8
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 6.3e-47 191.4 148 56.8
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 6.3e-47 191.4 135 65.9
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.8e-46 189.9 177 50.8
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 7.0e-46 188.0 155 56.8
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 4.2e-43 178.7 124 68.5
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 3.6e-42 175.6 133 60.2
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 7.5e-40 167.9 105 69.5
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 2.2e-39 166.4 104 69.2
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.1e-38 164.1 138 59.4
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 1.2e-37 160.6 132 54.5
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 4.5e-37 158.7 97 72.2
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 4.2e-35 152.1 110 61.8
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 5.5e-35 151.8 226 38.5
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 9.5e-35 151.0 150 50.7
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 1.8e-33 146.7 144 53.5
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 4.0e-33 145.6 90 71.1
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 7.5e-32 141.4 101 67.3
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 1.7e-31 140.2 118 50.8
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 7.0e-30 134.8 92 63.0
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 9.2e-30 134.4 87 69.0
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 3.5e-21 105.9 181 35.4
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 3.0e-20 102.8 164 38.4
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 3.0e-20 102.8 98 55.1
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 8.1e-18 94.7 194 36.6
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 5.4e-14 82.0 44 86.4


User provided reference genes

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