Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 8.8e-120 433.7 231 100.0
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 5.4e-77 291.6 228 68.0
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 2.0e-76 289.7 231 66.2
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 2.7e-76 289.3 218 68.3
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 3.5e-76 288.9 235 63.8
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 4.5e-76 288.5 226 66.4
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 1.3e-75 287.0 229 63.8
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 2.9e-75 285.8 228 68.4
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 3.8e-75 285.4 231 67.5
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 1.1e-74 283.9 233 65.2
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 1.5e-74 283.5 231 65.8
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.9e-74 283.1 228 64.0
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 3.3e-74 282.3 230 66.5
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.3e-74 282.3 232 69.0
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 7.3e-74 281.2 233 66.5
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 7.3e-74 281.2 224 66.1
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 9.5e-74 280.8 228 69.3
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 9.5e-74 280.8 219 66.2
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 1.2e-73 280.4 186 73.1
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 2.1e-73 279.6 186 72.0
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 2.1e-73 279.6 226 64.6
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 6.1e-73 278.1 190 72.1
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 8.0e-73 277.7 227 64.8
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.0e-72 277.3 230 63.9
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 3.0e-72 275.8 228 64.0
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 6.8e-72 274.6 200 70.0
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.2e-71 273.9 235 63.8
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 3.4e-71 272.3 209 67.0
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 3.4e-71 272.3 189 72.5
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 5.8e-71 271.6 209 67.0
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 5.8e-71 271.6 229 62.9
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 5.8e-71 271.6 183 75.4
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 9.8e-71 270.8 236 59.3
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 1.3e-70 270.4 236 59.3
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 1.7e-70 270.0 229 64.2
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 1.7e-70 270.0 229 62.4
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 2.9e-70 269.2 228 62.7
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.9e-70 269.2 248 63.7
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 6.4e-70 268.1 151 83.4
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 6.4e-70 268.1 184 73.9
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 1.1e-69 267.3 188 72.9
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.4e-69 266.9 230 61.3
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 3.2e-69 265.8 149 83.9
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 4.1e-69 265.4 211 64.9
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 5.4e-69 265.0 151 81.5
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 5.4e-69 265.0 237 62.0
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 2.0e-68 263.1 200 67.5
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 2.0e-68 263.1 148 81.8
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.7e-68 262.7 150 82.7
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.5e-68 262.3 237 60.8
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 4.6e-68 261.9 145 84.1
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 4.6e-68 261.9 232 61.2
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 6.0e-68 261.5 148 81.1
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 6.0e-68 261.5 144 84.0
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 6.0e-68 261.5 199 68.3
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.0e-67 260.8 219 60.7
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 1.0e-67 260.8 198 69.7
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.0e-67 260.8 215 62.8
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 2.3e-67 259.6 196 66.3
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.0e-67 259.2 216 65.7
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 3.0e-67 259.2 240 61.7
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 3.0e-67 259.2 150 82.0
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.0e-67 258.5 150 80.7
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 6.6e-67 258.1 147 84.4
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 1.5e-66 256.9 188 68.6
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.5e-66 256.1 212 68.4
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 5.6e-66 255.0 232 61.2
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 7.3e-66 254.6 191 68.1
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 9.5e-66 254.2 218 61.5
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 2.8e-65 252.7 185 73.5
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 3.6e-65 252.3 231 59.7
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 3.6e-65 252.3 150 79.3
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 4.7e-65 251.9 218 61.0
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 6.2e-65 251.5 152 78.9
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 6.2e-65 251.5 232 58.2
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 6.8e-64 248.1 150 77.3
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 6.8e-64 248.1 227 57.7
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 8.9e-64 247.7 151 76.8
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.5e-63 246.9 181 67.4
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 2.6e-63 246.1 151 76.2
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 2.6e-63 246.1 151 76.2
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 3.4e-63 245.7 144 79.2
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.7e-62 243.4 184 67.4
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 3.7e-62 242.3 149 75.8
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 3.7e-62 242.3 149 75.8
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 6.4e-62 241.5 185 65.4
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 1.9e-61 240.0 144 76.4
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 5.4e-61 238.4 137 81.8
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 6.0e-60 235.0 138 79.7
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 1.9e-58 229.9 141 75.9
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.5e-58 229.6 129 83.7
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 4.3e-58 228.8 128 85.2
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.6e-57 226.9 148 69.6
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 6.8e-56 221.5 143 72.7
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 8.1e-49 198.0 137 66.4
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 3.9e-43 179.1 98 81.6
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 5.1e-43 178.7 90 90.0
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 2.5e-42 176.4 255 45.9
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 3.3e-42 176.0 212 45.8
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.6e-41 173.7 178 52.2
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 6.2e-41 171.8 130 62.3
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 6.9e-40 168.3 187 53.5
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 6.0e-36 155.2 164 53.7
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.9e-34 150.2 132 57.6
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 2.1e-33 146.7 124 58.1
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 4.8e-33 145.6 80 83.8
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.4e-32 144.1 75 86.7
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 1.8e-32 143.7 84 77.4
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 6.9e-32 141.7 85 76.5
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.9e-29 133.7 83 80.7
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 2.7e-28 129.8 78 79.5
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.1e-24 117.9 68 80.9
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 1.9e-21 107.1 56 89.3


User provided reference genes

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