Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 0.0e+00 1801.2 968 100.0
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 3.6e-207 726.1 996 47.4
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 3.0e-206 723.0 1076 45.8
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 8.8e-206 721.5 1083 46.1
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 1.0e-201 708.0 1048 45.8
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 1.8e-195 687.2 981 45.4
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 2.0e-194 683.7 1013 45.2
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 3.5e-194 682.9 1033 43.7
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 3.2e-192 676.4 1036 44.8
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 1.2e-191 674.5 1019 44.7
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 8.0e-191 671.8 1056 43.5
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 6.8e-190 668.7 1021 43.8
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 7.0e-187 658.7 1038 44.2
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.2e-186 657.9 885 48.6
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 1.6e-186 657.5 1001 44.7
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.7e-186 656.8 1030 44.6
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.3e-185 653.7 1044 43.8
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 3.8e-185 652.9 1001 43.4
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 6.6e-185 652.1 1008 43.9
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 5.2e-182 642.5 1024 42.6
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 3.4e-181 639.8 1061 43.0
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 4.9e-180 636.0 1051 42.6
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 2.4e-179 633.6 1053 43.1
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 3.0e-177 626.7 1004 41.9
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 8.6e-177 625.2 1023 43.5
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 8.6e-177 625.2 1106 40.7
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 1.5e-176 624.4 1052 42.9
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 2.5e-176 623.6 1072 42.5
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 4.3e-176 622.9 1051 42.3
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 2.1e-175 620.5 1044 42.1
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 2.8e-175 620.2 1047 42.5
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 1.4e-174 617.8 1085 41.0
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 4.4e-173 612.8 1145 39.1
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 4.4e-173 612.8 1042 42.0
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 7.5e-173 612.1 1020 41.9
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 2.9e-172 610.1 958 43.5
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 3.7e-172 609.8 1078 41.3
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 3.7e-172 609.8 1044 42.2
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 1.1e-171 608.2 1062 40.4
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 7.0e-171 605.5 1104 40.9
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 1.2e-170 604.7 975 43.3
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 2.7e-170 603.6 1058 41.1
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 3.5e-170 603.2 1058 40.4
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 2.3e-169 600.5 1087 40.7
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 6.6e-169 599.0 747 49.3
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 6.2e-167 592.4 1156 38.8
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 1.4e-166 591.3 626 55.0
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 3.4e-165 586.6 1039 40.7
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 6.4e-164 582.4 1158 37.7
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.2e-162 578.2 1038 40.6
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 7.8e-162 575.5 995 41.9
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 7.8e-162 575.5 763 48.0
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 3.9e-161 573.2 1003 40.5
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 4.3e-160 569.7 1031 40.0
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 9.5e-160 568.5 1056 39.1
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 1.2e-159 568.2 965 40.8
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 1.2e-159 568.2 1137 39.1
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 1.8e-158 564.3 865 46.5
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 8.4e-156 555.4 1077 40.4
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 1.1e-155 555.1 1007 40.5
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 1.9e-155 554.3 1127 38.2
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 3.2e-155 553.5 960 40.9
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 5.4e-155 552.7 1069 40.4
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 3.5e-154 550.1 980 39.9
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 3.9e-153 546.6 1127 40.2
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 6.6e-153 545.8 1080 38.2
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 3.3e-152 543.5 1003 40.0
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 7.3e-152 542.3 704 48.6
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 9.6e-152 542.0 1002 42.5
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 9.6e-152 542.0 1002 41.1
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 2.1e-151 540.8 967 43.3
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 4.7e-151 539.7 1115 38.7
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 6.2e-151 539.3 977 42.0
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 6.9e-150 535.8 983 41.5
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 6.9e-150 535.8 983 41.5
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 8.9e-150 535.4 971 41.6
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 8.9e-150 535.4 971 41.6
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 1.3e-148 531.6 970 43.3
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 1.7e-148 531.2 988 41.4
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 6.6e-145 519.2 1021 37.9
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.4e-142 511.5 1105 36.3
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 2.4e-142 510.8 1052 38.6
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 5.3e-142 509.6 1076 37.1
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 2.6e-141 507.3 938 39.9
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 7.6e-141 505.8 1097 38.8
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 1.1e-139 501.9 732 44.8
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 8.7e-137 492.3 982 39.6
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 5.6e-136 489.6 1036 37.6
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 7.4e-136 489.2 1032 36.9
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 1.3e-135 488.4 553 53.0
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 8.4e-132 475.7 1022 36.4
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 4.0e-126 456.8 657 42.5
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 3.4e-125 453.8 653 45.6
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 1.9e-123 448.0 1009 36.2
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.2e-122 445.3 817 40.3
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 1.6e-119 434.9 823 39.5
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 2.0e-117 427.9 472 53.4
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 1.1e-112 412.1 781 37.5
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 7.7e-109 399.4 434 53.2
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 1.7e-108 398.3 784 36.6
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 1.4e-107 395.2 836 36.1
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 1.1e-102 379.0 860 34.2
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 2.4e-102 377.9 375 55.2
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.4e-96 357.1 626 42.0
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.9e-84 317.8 277 61.7
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 4.1e-70 270.8 763 34.5
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.3e-68 265.8 321 49.5
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.9e-65 253.1 392 44.6
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 1.5e-64 252.3 324 44.8
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 1.1e-59 236.1 207 60.4
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 8.3e-55 219.9 487 37.4
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 7.3e-51 206.8 367 40.9
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 2.2e-47 195.3 431 38.1
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 9.5e-43 179.9 513 31.2
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 6.4e-39 167.2 151 61.6
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 3.2e-38 164.9 521 32.2
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 4.1e-38 164.5 181 54.1
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 8.1e-34 150.2 1074 23.7
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 2.3e-28 132.1 221 38.0
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 6.2e-26 124.0 431 27.8
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 8.1e-26 123.6 162 48.1
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 4.9e-23 114.4 141 44.7
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.4e-23 113.6 111 58.6
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 1.4e-17 96.3 60 75.0
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 6.4e-15 87.4 66 65.2
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 2.1e-13 82.4 72 52.8
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.0e-12 80.1 52 76.9
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 5.1e-12 77.8 79 45.6
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 4.8e-10 71.2 136 36.8
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 4.0e-09 68.2 70 51.4
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.5e-08 66.2 69 46.4
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 4.5e-08 64.7 69 44.9
Actinidia02762 Actinidia chinensis HOM05D002567 ORTHO05D006538 4.9e-07 61.2 93 46.2
BcaB03g12895 Brassica carinata HOM05D002848 ORTHO05D003043 6.5e-07 60.8 239 32.2
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 6.5e-07 60.8 69 44.9
Nn6g32298 Nelumbo nucifera HOM05D002848 ORTHO05D003043 6.5e-07 60.8 269 29.0
arahy.Tifrunner.gnm1.ann1.6G1AZV Arachis hypogaea HOM05D002567 ORTHO05D006538 3.2e-06 58.5 130 36.2
Solyc09g074700.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 4.2e-06 58.2 60 55.0


User provided reference genes

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