Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 2.7e-39 164.9 81 100.0
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 3.5e-31 137.9 79 81.0
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 6.4e-25 117.1 80 70.0
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 6.4e-25 117.1 80 71.2
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 5.4e-24 114.0 76 69.7
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 7.0e-24 113.6 81 69.1
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 9.2e-24 113.2 74 71.6
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 1.6e-23 112.5 81 70.4
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 1.6e-23 112.5 81 70.4
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 2.0e-23 112.1 66 77.3
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 3.5e-23 111.3 71 74.6
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 5.9e-23 110.5 70 75.7
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 7.8e-23 110.2 81 69.1
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 1.7e-22 109.0 83 66.3
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 1.7e-22 109.0 71 73.2
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 3.9e-22 107.8 72 69.4
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 3.9e-22 107.8 71 70.4
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 3.9e-22 107.8 72 69.4
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 6.6e-22 107.1 72 70.8
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 6.6e-22 107.1 78 66.7
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.5e-21 105.9 74 64.9
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 1.9e-21 105.5 83 65.1
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 3.3e-21 104.8 83 63.9
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 4.3e-21 104.4 72 68.1
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 4.3e-21 104.4 82 63.4
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 4.3e-21 104.4 69 72.5
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 5.6e-21 104.0 75 65.3
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 9.5e-21 103.2 69 62.3
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 9.5e-21 103.2 81 61.7
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 1.6e-20 102.4 70 70.0
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 1.6e-20 102.4 80 63.8
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 2.1e-20 102.1 74 67.6
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 2.8e-20 101.7 80 61.2
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 2.8e-20 101.7 72 63.9
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 3.6e-20 101.3 69 65.2
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 4.7e-20 100.9 81 61.7
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 6.2e-20 100.5 69 66.7
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 6.2e-20 100.5 80 58.8
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 6.2e-20 100.5 72 63.9
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 6.2e-20 100.5 72 63.9
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 1.1e-19 99.8 80 60.0
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 1.4e-19 99.4 83 61.4
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.8e-19 99.0 75 62.7
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 3.1e-19 98.2 69 68.1
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 3.1e-19 98.2 74 64.9
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 4.0e-19 97.8 75 62.7
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 5.2e-19 97.4 75 64.0
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 6.8e-19 97.1 72 63.9
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 8.9e-19 96.7 72 65.3
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 8.9e-19 96.7 74 63.5
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 1.5e-18 95.9 70 64.3
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 1.5e-18 95.9 75 62.7
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 2.0e-18 95.5 59 74.6
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 2.6e-18 95.1 75 61.3
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 3.4e-18 94.7 72 63.9
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 3.4e-18 94.7 75 61.3
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.4e-18 94.4 74 59.5
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 4.4e-18 94.4 75 61.3
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 4.4e-18 94.4 72 63.9
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 4.4e-18 94.4 82 58.5
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 5.8e-18 94.0 73 61.6
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 5.8e-18 94.0 73 61.6
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 7.5e-18 93.6 75 61.3
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 9.8e-18 93.2 78 60.3
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 9.8e-18 93.2 69 60.9
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 9.8e-18 93.2 80 60.0
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 9.8e-18 93.2 72 61.1
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 9.8e-18 93.2 69 63.8
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.7e-17 92.4 75 58.7
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 1.7e-17 92.4 79 55.7
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 1.7e-17 92.4 77 59.7
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 1.7e-17 92.4 73 57.5
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 2.2e-17 92.0 70 65.7
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 1.1e-16 89.7 65 66.2
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 1.9e-16 89.0 70 62.9
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 4.1e-16 87.8 81 59.3
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 7.0e-16 87.0 62 64.5
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 9.2e-16 86.7 84 59.5
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 6.0e-15 84.0 60 66.7
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 6.0e-15 84.0 60 66.7
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.0e-14 83.2 52 71.2
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 1.0e-14 83.2 64 59.4
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 1.3e-14 82.8 60 66.7
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 1.3e-14 82.8 60 66.7
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 1.7e-14 82.4 72 58.3
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 1.7e-14 82.4 64 60.9
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 1.7e-14 82.4 65 64.6
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 5.0e-14 80.9 62 64.5
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.9e-13 79.0 50 76.0
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 2.5e-13 78.6 49 77.6
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 9.5e-13 76.6 62 61.3
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 9.5e-13 76.6 62 59.7
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.2e-12 76.3 56 60.7
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 2.8e-12 75.1 52 61.5
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 4.7e-12 74.3 44 75.0
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 8.1e-12 73.6 65 56.9
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.4e-11 72.8 48 70.8
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 1.8e-11 72.4 49 67.3
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 7.5e-10 67.0 46 60.9
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 1.9e-08 62.4 47 57.4
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 2.7e-07 58.5 58 50.0


User provided reference genes

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