Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00139 Erythranthe guttata HOM05D021624 ORTHO05D015999 2.1e-112 409.1 213 100.0
SGA_v2.0_scaffold1G00355 Striga asiatica HOM05D021624 ORTHO05D015999 2.0e-62 243.0 204 60.8
MSTRG.18138 Avicennia marina HOM05D021624 ORTHO05D015999 1.6e-59 233.4 208 60.1
MSTRG.21643 Avicennia marina HOM05D021624 ORTHO05D015999 5.7e-49 198.4 213 53.5
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 2.7e-43 179.5 131 68.7
unitig_22.g5237 Utricularia gibba HOM05D021624 ORTHO05D015999 3.0e-42 176.0 206 47.1
unitig_0.g675 Utricularia gibba HOM05D021624 ORTHO05D015999 1.7e-40 170.2 200 46.0
CSS0043898 Camellia sinensis var. sinensis HOM05D003556 ORTHO05D003404 3.0e-13 79.7 158 31.0
Cfa005888 Carpinus fangiana HOM05D003556 ORTHO05D003404 1.5e-12 77.4 129 37.2
Haze_04964 Corylus avellana HOM05D003556 ORTHO05D003404 4.3e-12 75.9 128 35.9
Sed0018956 Sechium edule HOM05D003556 ORTHO05D003404 5.6e-12 75.5 120 35.0
Dinv19674 Davidia involucrata HOM05D003556 ORTHO05D003404 1.2e-11 74.3 159 30.2
Lj5g0004990 Lotus japonicus HOM05D003556 ORTHO05D003404 1.6e-11 73.9 130 31.5
Thecc.01G303600 Theobroma cacao HOM05D003556 ORTHO05D003404 2.8e-11 73.2 177 28.8
Atru.chr5.1112 Acer truncatum HOM05D003556 ORTHO05D003404 3.6e-11 72.8 150 30.0
MELO3C017944.2 Cucumis melo HOM05D003556 ORTHO05D003404 6.2e-11 72.0 114 36.0
Sed0000124 Sechium edule HOM05D003556 ORTHO05D003404 6.2e-11 72.0 121 33.9
ClCG10G011070 Citrullus lanatus HOM05D003556 ORTHO05D003404 8.1e-11 71.6 158 33.5
CsaV3_4G000950 Cucumis sativus L. HOM05D003556 ORTHO05D003404 8.1e-11 71.6 159 33.3
Medtr4g071020 Medicago truncatula HOM05D003556 ORTHO05D003404 8.1e-11 71.6 119 33.6
Sc25g0000800 Simmondsia chinensis HOM05D003556 ORTHO05D003404 8.1e-11 71.6 139 33.8
Aqoxy2G02898 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.4e-10 70.9 126 33.3
Oeu011950.2 Olea europaea HOM05D004055 ORTHO05D004795 1.8e-10 70.5 75 41.3
Duzib133G0465 Durio zibethinus HOM05D003556 ORTHO05D003404 6.8e-10 68.6 160 28.8
CsaV3_1G038650 Cucumis sativus L. HOM05D003556 ORTHO05D003404 8.9e-10 68.2 121 30.6
CAN.G1155.33 Capsicum annuum HOM05D022522 ORTHO05D015999 1.2e-09 67.8 153 33.3
CANSAT25G1336 Cannabis sativa HOM05D003556 ORTHO05D003404 1.5e-09 67.4 161 29.2
Sed0028173 Sechium edule HOM05D003556 ORTHO05D003404 1.5e-09 67.4 171 29.2
PGR119G1148 Punica granatum HOM05D003556 ORTHO05D003404 2.0e-09 67.0 177 28.8
THA.LOC104825958 Tarenaya hassleriana HOM05D003556 ORTHO05D003404 2.6e-09 66.6 151 29.8
QL12p028082 Quercus lobata HOM05D003556 ORTHO05D003404 3.4e-09 66.2 118 34.7
Actinidia21437 Actinidia chinensis HOM05D003556 ORTHO05D003404 4.4e-09 65.9 204 27.5
Glyma.10G017300 Glycine max HOM05D003556 ORTHO05D003404 4.4e-09 65.9 132 31.1
MELO3C015291.2 Cucumis melo HOM05D003556 ORTHO05D003404 5.8e-09 65.5 155 29.0
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 5.8e-09 65.5 122 32.0
Ca_09185_v3 Cicer arietinum L. HOM05D003556 ORTHO05D003404 7.5e-09 65.1 118 33.9
Psat0s1683g0040 Pisum sativum HOM05D003556 ORTHO05D003404 9.8e-09 64.7 135 30.4
TPR.G30505 Trifolium pratense HOM05D002265 ORTHO05D002400 1.3e-08 64.3 146 29.5
ClCG03G017200 Citrullus lanatus HOM05D003556 ORTHO05D003404 1.7e-08 63.9 121 29.8
COL.COLO4_23319 Corchorus olitorius HOM05D003556 ORTHO05D003404 1.7e-08 63.9 171 26.9
Peaxi162Scf00047g00005 Petunia axillaris HOM05D022522 ORTHO05D015999 1.7e-08 63.9 149 30.2
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 2.2e-08 63.5 133 28.6
Dinv40359 Davidia involucrata HOM05D003556 ORTHO05D003404 2.2e-08 63.5 137 29.2
Lalb_Chr04g0259851 Lupinus albus HOM05D003556 ORTHO05D003404 2.2e-08 63.5 122 33.6
MD03G1290800 Malus domestica HOM05D003556 ORTHO05D003404 2.2e-08 63.5 116 30.2
Sed0024461 Sechium edule HOM05D003556 ORTHO05D003404 2.2e-08 63.5 149 28.9
PGSC0003DMG400020591 Solanum tuberosum HOM05D022522 ORTHO05D015999 2.2e-08 63.5 185 30.3
Ciclev10023798m.g Citrus clementina HOM05D003556 ORTHO05D003404 2.9e-08 63.2 151 29.8
RcHm_v2.0_Chr6g0294271 Rosa chinensis HOM05D003556 ORTHO05D003404 2.9e-08 63.2 116 27.6
Solyc09g092350.1 Solanum lycopersicum HOM05D022522 ORTHO05D015999 2.9e-08 63.2 153 30.7
Sopen09g035250 Solanum pennellii HOM05D022522 ORTHO05D015999 2.9e-08 63.2 153 30.7
Aa31LG10G420 Aethionema arabicum HOM05D003556 ORTHO05D003404 3.7e-08 62.8 147 29.9
Dinv33067 Davidia involucrata HOM05D003556 ORTHO05D003404 3.7e-08 62.8 139 28.1
Glyma.02G016700 Glycine max HOM05D003556 ORTHO05D003404 3.7e-08 62.8 117 31.6
Phvul.007G246800 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 4.9e-08 62.4 127 28.3
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 6.4e-08 62.0 137 27.7
Lalb_Chr02g0146451 Lupinus albus HOM05D003556 ORTHO05D003404 6.4e-08 62.0 127 29.1
Sabra11G0000800 Salix brachista HOM05D003556 ORTHO05D003404 6.4e-08 62.0 162 27.2
TPR.G9645 Trifolium pratense HOM05D003556 ORTHO05D003404 6.4e-08 62.0 206 26.7
BcaB01g02439 Brassica carinata HOM05D003556 ORTHO05D003404 8.3e-08 61.6 155 29.0
A03p31140 Brassica napus HOM05D003556 ORTHO05D003404 8.3e-08 61.6 155 29.0
TWI34G1970 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 8.3e-08 61.6 138 28.3
TWI59G1361 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 8.3e-08 61.6 162 29.6
A06p00030 Brassica napus HOM05D003556 ORTHO05D003404 1.1e-07 61.2 142 27.5
BraA03t12291Z Brassica rapa HOM05D003556 ORTHO05D003404 1.1e-07 61.2 155 29.0
BraA06t23219Z Brassica rapa HOM05D003556 ORTHO05D003404 1.1e-07 61.2 142 27.5
Thhalv10029000m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 1.1e-07 61.2 154 29.2
Potri.004G016500 Populus trichocarpa HOM05D003556 ORTHO05D003404 1.4e-07 60.8 160 28.1
BcaC01g06767 Brassica carinata HOM05D003556 ORTHO05D003404 2.4e-07 60.1 155 28.4
C03p37950 Brassica napus HOM05D003556 ORTHO05D003404 2.4e-07 60.1 155 28.4
BolC3t16082H Brassica oleracea HOM05D003556 ORTHO05D003404 2.4e-07 60.1 155 28.4
MBI18_g25093_MAGBIO Magnolia biondii HOM05D003556 ORTHO05D003404 3.2e-07 59.7 162 29.0
MD07G1088700 Malus domestica HOM05D001445 ORTHO05D001261 3.2e-07 59.7 117 31.6
Nn3g21538 Nelumbo nucifera HOM05D003556 ORTHO05D003404 3.2e-07 59.7 118 28.0
THA.LOC104801288 Tarenaya hassleriana HOM05D003556 ORTHO05D003404 3.2e-07 59.7 151 28.5
VMungo0720G1834 Vigna mungo HOM05D003556 ORTHO05D003404 3.2e-07 59.7 127 29.9
BcaB07g33190 Brassica carinata HOM05D003556 ORTHO05D003404 5.4e-07 58.9 138 26.8
BcaC08g44217 Brassica carinata HOM05D003556 ORTHO05D003404 5.4e-07 58.9 135 27.4
C06p16220 Brassica napus HOM05D003556 ORTHO05D003404 5.4e-07 58.9 135 27.4
BolC6t36819H Brassica oleracea HOM05D003556 ORTHO05D003404 5.4e-07 58.9 135 27.4
MD02G1225200 Malus domestica HOM05D001445 ORTHO05D001261 7.1e-07 58.5 124 26.6
TWI23G0284 Tripterygium wilfordii HOM05D003556 ORTHO05D003404 7.1e-07 58.5 162 29.0
BcaC03g16110 Brassica carinata HOM05D003556 ORTHO05D003404 9.2e-07 58.2 155 28.4
A02p24580 Brassica napus HOM05D003556 ORTHO05D003404 9.2e-07 58.2 155 28.4
A05p17320 Brassica napus HOM05D003556 ORTHO05D003404 9.2e-07 58.2 140 28.6
C02p38810 Brassica napus HOM05D003556 ORTHO05D003404 9.2e-07 58.2 155 28.4
BolC2t09897H Brassica oleracea HOM05D003556 ORTHO05D003404 9.2e-07 58.2 155 28.4
BraA02t07448Z Brassica rapa HOM05D003556 ORTHO05D003404 9.2e-07 58.2 155 28.4
BraA05t20629Z Brassica rapa HOM05D003556 ORTHO05D003404 9.2e-07 58.2 140 28.6
CARHR250460 Cardamine hirsuta HOM05D003556 ORTHO05D003404 9.2e-07 58.2 154 28.6
Thhalv10012280m.g Eutrema salsugineum HOM05D003556 ORTHO05D003404 9.2e-07 58.2 164 26.8
Lj1g0023613 Lotus japonicus HOM05D003556 ORTHO05D003404 9.2e-07 58.2 159 30.2
Lalb_Chr06g0166521 Lupinus albus HOM05D003556 ORTHO05D003404 1.2e-06 57.8 128 28.9
Medtr7g108865 Medicago truncatula HOM05D003556 ORTHO05D003404 1.2e-06 57.8 125 28.0
CANSAT25G0193 Cannabis sativa HOM05D003556 ORTHO05D003404 1.6e-06 57.4 136 27.9
Glyma.03G215700 Glycine max HOM05D003556 ORTHO05D003404 1.6e-06 57.4 131 29.8
THA.LOC104822713 Tarenaya hassleriana HOM05D003556 ORTHO05D003404 1.6e-06 57.4 135 26.7
A08p00310 Brassica napus HOM05D003556 ORTHO05D003404 2.1e-06 57.0 138 26.1
BraA08t32089Z Brassica rapa HOM05D003556 ORTHO05D003404 2.1e-06 57.0 138 26.1
Sabra01G0098200 Salix brachista HOM05D003556 ORTHO05D003404 2.1e-06 57.0 169 28.4
HPP92_002230 Vanilla planifolia HOM05D003556 ORTHO05D003404 2.7e-06 56.6 182 25.3
VMungo0331G0621 Vigna mungo HOM05D003556 ORTHO05D003404 2.7e-06 56.6 130 28.5
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 3.5e-06 56.2 202 25.7
Phvul.001G208800 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 3.5e-06 56.2 123 30.1
Phvul.001G209000 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 3.5e-06 56.2 163 31.3
AL1G63880 Arabidopsis lyrata HOM05D003556 ORTHO05D003404 4.6e-06 55.8 142 27.5
CARHR045450 Cardamine hirsuta HOM05D003556 ORTHO05D003404 6.0e-06 55.5 142 27.5
BcaC04g24050 Brassica carinata HOM05D003556 ORTHO05D003404 7.8e-06 55.1 155 27.1
A09p01710 Brassica napus HOM05D003556 ORTHO05D003404 7.8e-06 55.1 155 27.1
C09p01780 Brassica napus HOM05D003556 ORTHO05D003404 7.8e-06 55.1 155 27.1
BolC9t53113H Brassica oleracea HOM05D003556 ORTHO05D003404 7.8e-06 55.1 155 27.1
BraA09t35826Z Brassica rapa HOM05D003556 ORTHO05D003404 7.8e-06 55.1 155 27.1
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 7.8e-06 55.1 140 28.6
Phvul.001G208600 Phaseolus vulgaris HOM05D003556 ORTHO05D003404 7.8e-06 55.1 126 30.2


User provided reference genes

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