Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.9e-100 368.2 200 100.0
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 9.2e-33 144.4 175 48.6
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 1.0e-31 141.0 178 46.6
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.7e-31 140.2 143 55.2
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 1.7e-31 140.2 178 45.5
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.0e-31 139.4 178 47.2
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 3.0e-31 139.4 177 45.8
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 3.0e-31 139.4 174 46.6
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 3.9e-31 139.0 177 45.2
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 6.6e-31 138.3 177 45.2
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 6.6e-31 138.3 177 45.2
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 8.6e-31 137.9 177 42.4
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.1e-30 137.5 176 47.2
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.1e-30 137.5 176 47.2
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 1.5e-30 137.1 177 45.8
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 2.5e-30 136.3 178 45.5
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.3e-30 135.6 178 40.4
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 4.3e-30 135.6 178 41.0
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 8.0e-29 131.3 177 44.6
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.1e-28 131.0 175 45.1
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 1.4e-28 130.6 178 39.9
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.8e-28 130.2 177 42.9
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.8e-28 130.2 178 41.0
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.3e-28 129.8 175 45.1
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 2.3e-28 129.8 174 44.8
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 3.1e-28 129.4 177 44.1
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 4.0e-28 129.0 177 42.9
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 4.0e-28 129.0 175 45.7
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 1.2e-27 127.5 225 40.0
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 1.2e-27 127.5 175 41.7
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 2.6e-27 126.3 175 42.3
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 2.6e-27 126.3 177 41.8
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.6e-27 126.3 177 41.8
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 2.6e-27 126.3 177 41.8
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 4.4e-27 125.6 199 41.2
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 5.8e-27 125.2 177 41.2
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 9.8e-27 124.4 176 44.3
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 9.8e-27 124.4 178 42.7
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 1.3e-26 124.0 179 40.8
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.7e-26 123.6 177 42.4
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.7e-26 123.6 177 42.4
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 2.2e-26 123.2 179 40.8
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 3.7e-26 122.5 177 42.9
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 4.9e-26 122.1 177 41.8
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 8.3e-26 121.3 177 40.7
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 8.3e-26 121.3 175 45.1
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.1e-25 120.9 177 41.8
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 1.9e-25 120.2 181 43.6
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.9e-25 120.2 185 40.5
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.9e-25 120.2 177 40.1
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 2.4e-25 119.8 177 41.2
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 2.4e-25 119.8 177 41.8
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 4.1e-25 119.0 179 38.5
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 4.1e-25 119.0 208 40.9
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.2e-24 117.5 177 40.7
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.6e-24 117.1 175 38.3
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 4.6e-24 115.5 178 39.3
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 6.0e-24 115.2 178 42.1
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 3.9e-23 112.5 174 38.5
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 3.9e-23 112.5 177 37.9
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.0e-23 112.1 175 37.7
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 6.6e-23 111.7 230 35.7
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 6.6e-23 111.7 177 40.7
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 8.6e-23 111.3 177 41.8
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 1.1e-22 110.9 175 40.0
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.1e-22 110.9 182 38.5
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.5e-22 110.5 80 57.5
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 2.5e-22 109.8 179 38.0
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 2.5e-22 109.8 178 41.0
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 2.5e-22 109.8 175 40.0
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 3.3e-22 109.4 147 43.5
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 4.3e-22 109.0 85 56.5
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 5.6e-22 108.6 81 60.5
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 9.5e-22 107.8 177 39.5
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 1.2e-21 107.5 177 36.7
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.2e-21 107.5 145 43.4
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 4.7e-21 105.5 81 56.8
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 8.1e-21 104.8 176 38.6
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.1e-20 104.4 177 39.5
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 4.0e-20 102.4 145 43.4
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 5.2e-20 102.1 136 44.9
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 8.9e-20 101.3 178 37.1
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 1.2e-19 100.9 177 39.0
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 1.5e-19 100.5 151 41.7
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.0e-19 100.1 178 38.2
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.0e-19 100.1 81 54.3
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 3.4e-19 99.4 207 35.3
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 2.9e-18 96.3 175 39.4
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 3.7e-18 95.9 175 38.9
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 6.4e-18 95.1 177 37.3
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.4e-17 94.0 179 35.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.4e-17 94.0 179 34.6
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 1.9e-17 93.6 173 38.7
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.9e-17 93.6 173 38.7
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 2.4e-17 93.2 151 40.4
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 3.2e-17 92.8 173 38.2
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 5.4e-17 92.0 173 38.2
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 5.4e-17 92.0 180 35.6
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 1.2e-16 90.9 177 35.6
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.2e-16 90.9 177 35.6
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 1.2e-16 90.9 81 50.6
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.7e-15 87.0 177 34.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 2.5e-14 83.2 152 35.5
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 2.1e-13 80.1 177 33.3
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 2.8e-13 79.7 179 32.4
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 2.8e-13 79.7 70 51.4
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 2.4e-12 76.6 177 32.8
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.2e-11 74.3 81 49.4
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 2.0e-11 73.6 177 29.4
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.9e-10 68.9 131 34.4
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 6.4e-10 68.6 177 28.2
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 4.1e-09 65.9 179 31.3
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 9.2e-09 64.7 73 45.2
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 2.7e-08 63.2 73 41.1
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.5e-08 62.8 111 33.3
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 4.6e-08 62.4 105 35.2
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 2.3e-07 60.1 80 38.8
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.0e-07 59.7 112 32.1
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 8.7e-07 58.2 106 35.8
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 3.3e-06 56.2 111 34.2


User provided reference genes

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