Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 5.7e-107 391.0 202 100.0
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.2e-77 293.5 200 78.0
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 1.4e-76 290.0 201 77.1
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 1.6e-69 266.5 204 73.0
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.1e-68 262.3 204 72.5
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 8.9e-68 260.8 204 72.5
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 2.0e-67 259.6 201 73.1
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.9e-65 253.1 218 66.5
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 3.2e-65 252.3 218 67.4
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 4.1e-65 251.9 184 71.7
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 5.4e-65 251.5 181 72.4
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 5.4e-65 251.5 187 71.1
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 7.0e-65 251.1 182 72.5
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 2.0e-64 249.6 197 68.5
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 4.6e-64 248.4 198 69.2
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 7.8e-64 247.7 181 69.6
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.3e-63 246.9 186 68.8
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.7e-63 246.5 186 68.8
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 3.0e-63 245.7 184 70.1
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.9e-63 245.4 184 71.2
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 6.6e-63 244.6 183 73.8
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 6.6e-63 244.6 205 67.8
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 8.6e-63 244.2 181 68.5
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.9e-62 243.0 191 70.7
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 1.9e-62 243.0 194 70.1
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 2.5e-62 242.7 146 84.9
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.5e-62 242.7 184 67.4
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 2.5e-62 242.7 179 72.6
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 3.3e-62 242.3 157 77.1
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 9.5e-62 240.7 185 68.1
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 1.6e-61 240.0 184 66.3
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 3.6e-61 238.8 185 67.6
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.1e-60 237.3 182 65.4
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.4e-60 236.9 163 74.2
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 2.3e-60 236.1 186 66.7
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 3.1e-60 235.7 151 80.1
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.0e-60 235.3 197 67.0
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 5.2e-60 235.0 185 67.6
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 8.9e-60 234.2 208 63.0
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 1.2e-59 233.8 148 79.7
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 7.5e-59 231.1 200 67.0
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 7.5e-59 231.1 194 64.4
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 9.8e-59 230.7 163 74.2
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.3e-58 230.3 201 64.7
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 2.2e-58 229.6 160 75.0
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 2.9e-58 229.2 154 77.9
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 4.9e-58 228.4 200 63.0
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 4.9e-58 228.4 192 61.5
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 8.3e-58 227.6 197 63.5
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.4e-57 226.9 174 69.0
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 1.9e-57 226.5 172 70.9
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 2.4e-57 226.1 153 75.8
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 5.4e-57 224.9 218 58.3
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.2e-56 223.8 218 58.3
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.6e-56 223.4 156 75.0
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 1.6e-56 223.4 164 70.7
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 2.1e-56 223.0 162 72.2
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 2.1e-56 223.0 161 70.8
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 2.1e-56 223.0 186 65.6
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 2.7e-56 222.6 176 68.2
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 2.7e-56 222.6 176 68.2
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 4.6e-56 221.9 192 64.6
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 6.0e-56 221.5 176 68.2
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.0e-55 220.7 183 66.7
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 1.3e-55 220.3 169 69.2
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 1.7e-55 219.9 169 68.0
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 3.9e-55 218.8 161 73.9
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 3.9e-55 218.8 178 65.7
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 8.6e-55 217.6 161 70.8
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 1.5e-54 216.9 162 69.1
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 5.6e-54 214.9 190 60.5
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 5.6e-54 214.9 197 62.4
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 5.6e-54 214.9 164 70.7
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 7.3e-54 214.5 197 61.9
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 9.5e-54 214.2 179 66.5
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.2e-53 213.8 155 71.6
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 1.4e-52 210.3 140 76.4
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 2.3e-52 209.5 208 58.7
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 3.1e-52 209.1 170 67.1
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 4.0e-52 208.8 170 67.1
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 4.0e-52 208.8 170 67.1
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.5e-51 206.8 142 73.9
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 7.6e-51 204.5 165 69.1
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 2.9e-50 202.6 152 71.7
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 2.9e-50 202.6 195 58.5
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 2.1e-48 196.4 129 71.3
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 1.3e-47 193.7 138 68.8
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 1.7e-47 193.4 131 77.1
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.4e-43 179.1 199 54.8
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 3.8e-42 175.6 179 55.9
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 8.4e-42 174.5 202 50.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.4e-41 173.7 106 84.9
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 3.2e-41 172.6 125 69.6
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 3.2e-41 172.6 112 83.9
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 9.3e-41 171.0 108 81.5
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 3.5e-40 169.1 99 84.8
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 7.8e-40 167.9 103 86.4
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 2.8e-37 159.5 97 82.5
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.0e-36 155.6 207 47.8
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 2.6e-35 152.9 102 75.5
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 3.5e-32 142.5 118 64.4
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 5.1e-31 138.7 152 53.9
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 2.5e-30 136.3 126 53.2
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 4.3e-30 135.6 108 64.8
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 1.6e-29 133.7 124 55.6
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.7e-26 123.6 79 81.0
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.4e-25 120.6 71 90.1
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 1.4e-25 120.6 71 90.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.4e-25 119.8 138 51.4
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.2e-25 119.0 119 55.5
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 3.0e-23 112.8 141 51.1
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 7.4e-22 108.2 63 87.3
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 4.0e-20 102.4 112 51.8
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.7e-16 89.7 109 39.4
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 1.1e-09 67.8 39 79.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 1.1e-09 67.8 39 79.5


User provided reference genes

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