Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 3.3e-72 275.0 145 100.0
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 5.6e-32 141.4 145 55.9
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 8.4e-28 127.5 150 50.7
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 1.9e-27 126.3 150 50.7
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.9e-27 126.3 144 54.2
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 2.4e-27 125.9 150 50.7
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 5.5e-27 124.8 144 52.8
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 7.1e-27 124.4 145 46.9
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 7.1e-27 124.4 149 49.7
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.6e-26 123.2 146 49.3
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 7.9e-26 120.9 144 50.0
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 3.9e-25 118.6 146 48.6
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 5.1e-25 118.2 147 48.3
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 5.1e-25 118.2 149 47.0
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 5.1e-25 118.2 145 46.2
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 6.7e-25 117.9 150 46.7
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 6.7e-25 117.9 146 47.9
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 1.1e-24 117.1 147 48.3
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 1.1e-24 117.1 149 47.0
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.1e-24 117.1 150 46.0
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 1.5e-24 116.7 149 49.7
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 1.9e-24 116.3 149 47.0
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 2.5e-24 115.9 145 45.5
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 2.5e-24 115.9 147 46.9
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 4.3e-24 115.2 147 49.7
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 9.6e-24 114.0 145 48.3
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 1.3e-23 113.6 145 47.6
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 8.2e-23 110.9 146 47.3
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 8.2e-23 110.9 149 46.3
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 1.1e-22 110.5 152 46.7
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.4e-22 110.2 144 46.5
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 1.4e-22 110.2 145 46.9
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 2.4e-22 109.4 149 47.0
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 2.4e-22 109.4 173 45.1
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 4.0e-22 108.6 149 47.0
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 5.3e-22 108.2 149 47.7
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 5.3e-22 108.2 152 46.1
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 6.9e-22 107.8 145 45.5
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 1.2e-21 107.1 149 47.7
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.2e-21 107.1 154 44.2
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 1.2e-21 107.1 145 41.4
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 1.5e-21 106.7 149 47.0
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 1.5e-21 106.7 149 46.3
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 3.4e-21 105.5 145 45.5
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 1.0e-20 104.0 149 45.0
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 1.3e-20 103.6 152 42.1
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 6.5e-20 101.3 149 46.3
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.2e-19 99.0 126 47.6
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 4.2e-19 98.6 145 42.1
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 4.6e-18 95.1 124 46.0
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 2.3e-17 92.8 148 40.5
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 6.7e-17 91.3 148 42.6
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 2.5e-16 89.4 123 45.5
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 9.7e-16 87.4 150 40.0
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 2.2e-15 86.3 187 37.4
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 4.8e-15 85.1 136 41.9
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.4e-14 83.6 70 65.7
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 2.4e-14 82.8 64 62.5
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 3.1e-14 82.4 128 43.0
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 5.3e-14 81.6 63 60.3
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 6.9e-14 81.3 67 61.2
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 1.5e-13 80.1 63 60.3
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 2.0e-13 79.7 65 56.9
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 2.6e-13 79.3 184 34.2
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 2.6e-13 79.3 63 58.7
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 3.4e-13 79.0 72 61.1
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 4.5e-13 78.6 63 58.7
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 4.5e-13 78.6 61 60.7
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 7.7e-13 77.8 63 60.3
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 1.0e-12 77.4 62 58.1
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.7e-12 76.6 136 40.4
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 2.9e-12 75.9 166 34.9
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 8.5e-12 74.3 66 56.1
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 3.2e-11 72.4 145 37.9
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 5.5e-11 71.6 128 36.7
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 7.2e-11 71.2 55 60.0
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.2e-10 70.5 62 56.5
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 2.1e-10 69.7 53 60.4
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 3.0e-09 65.9 54 55.6
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 6.7e-09 64.7 53 56.6
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 8.8e-09 64.3 56 55.4
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 4.8e-07 58.5 66 45.5
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 6.3e-07 58.2 54 55.6
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 5.3e-06 55.1 45 55.6


User provided reference genes

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