Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 1.0e-103 380.2 204 100.0
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 1.0e-63 247.3 209 68.4
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 1.3e-63 246.9 216 68.1
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 2.8e-61 239.2 213 65.7
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 1.1e-60 237.3 203 68.5
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 4.0e-60 235.3 213 65.3
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 4.5e-59 231.9 209 64.1
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 5.8e-59 231.5 217 63.1
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 2.9e-58 229.2 209 62.2
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 8.4e-58 227.6 215 60.9
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.1e-57 227.3 230 56.1
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 1.9e-57 226.5 203 64.0
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 2.4e-57 226.1 216 61.6
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 5.5e-57 224.9 209 64.6
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 7.1e-57 224.6 213 62.9
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 7.1e-57 224.6 209 63.6
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 1.2e-56 223.8 209 64.6
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 1.6e-56 223.4 209 62.2
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 2.1e-56 223.0 214 62.6
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 4.6e-56 221.9 214 60.7
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 4.6e-56 221.9 212 63.2
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 4.6e-56 221.9 220 56.4
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 6.0e-56 221.5 210 59.5
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 6.0e-56 221.5 209 64.1
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 1.0e-55 220.7 212 61.3
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 1.3e-55 220.3 210 61.9
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.8e-55 219.9 213 60.6
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 2.3e-55 219.5 212 60.4
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 2.3e-55 219.5 213 59.6
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 2.3e-55 219.5 209 62.7
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 3.0e-55 219.2 215 58.1
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 3.9e-55 218.8 231 55.8
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 3.9e-55 218.8 214 61.2
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 6.7e-55 218.0 209 62.7
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 8.7e-55 217.6 208 60.1
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 1.5e-54 216.9 204 59.3
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 2.5e-54 216.1 212 59.0
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 3.3e-54 215.7 213 58.7
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 5.6e-54 214.9 213 62.0
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 7.4e-54 214.5 215 59.5
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 1.3e-53 213.8 202 62.9
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 2.1e-53 213.0 205 62.0
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 2.1e-53 213.0 203 62.1
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 2.8e-53 212.6 203 63.5
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 3.7e-53 212.2 208 62.0
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 3.7e-53 212.2 216 58.8
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 8.1e-53 211.1 230 56.5
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 1.1e-52 210.7 232 56.5
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 1.1e-52 210.7 214 58.4
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.4e-52 210.3 214 58.9
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 1.8e-52 209.9 216 60.2
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 2.4e-52 209.5 230 57.8
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.4e-52 209.5 216 57.9
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 4.0e-52 208.8 216 58.3
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 6.9e-52 208.0 210 57.6
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 6.9e-52 208.0 216 57.9
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 9.0e-52 207.6 218 57.8
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 9.0e-52 207.6 201 60.2
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 2.6e-51 206.1 213 59.2
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 1.3e-50 203.8 212 57.1
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 1.7e-50 203.4 215 56.3
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 2.2e-50 203.0 218 57.3
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 2.2e-50 203.0 215 56.7
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 2.2e-50 203.0 217 55.3
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 2.9e-50 202.6 198 58.1
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 3.8e-50 202.2 223 54.7
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 4.9e-50 201.8 217 55.3
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 6.5e-50 201.4 214 57.9
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 8.4e-50 201.1 204 60.3
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 1.4e-49 200.3 216 56.0
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 2.5e-49 199.5 215 57.2
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 4.2e-49 198.7 223 53.4
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 7.1e-49 198.0 203 56.2
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 9.3e-49 197.6 206 57.8
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.6e-48 196.8 237 52.7
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 3.5e-48 195.7 214 54.2
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 2.3e-47 193.0 217 54.8
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 3.0e-47 192.6 209 58.4
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 6.7e-47 191.4 201 56.7
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 1.1e-46 190.7 217 54.4
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 4.3e-46 188.7 194 57.7
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 4.3e-46 188.7 194 57.7
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 4.8e-45 185.3 199 57.3
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 1.1e-44 184.1 230 51.3
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 1.8e-44 183.3 203 55.2
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 2.4e-44 183.0 202 56.4
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 2.4e-44 183.0 202 56.4
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 4.1e-44 182.2 198 57.1
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 4.1e-44 182.2 198 57.1
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 3.4e-43 179.1 194 55.2
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 4.5e-43 178.7 118 78.0
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 1.0e-42 177.6 203 51.7
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.3e-42 177.2 123 74.8
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 6.5e-42 174.9 200 52.0
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 8.5e-42 174.5 173 59.5
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 4.6e-40 168.7 212 50.9
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 9.7e-38 161.0 123 67.5
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 1.6e-37 160.2 118 69.5
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 3.7e-37 159.1 116 72.4
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 8.2e-37 157.9 205 47.3
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 4.3e-30 135.6 88 77.3
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 1.7e-29 133.7 82 79.3
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 2.2e-29 133.3 81 81.5
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 3.4e-27 125.9 164 47.6
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.3e-26 124.0 206 44.2
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.7e-26 123.6 161 48.4
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 2.9e-26 122.9 205 42.4
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 1.4e-25 120.6 206 41.7
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 3.6e-24 115.9 216 41.7
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 3.0e-23 112.8 210 41.0
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 2.7e-16 89.7 126 42.9
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 6.1e-16 88.6 213 36.2
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.3e-15 86.7 166 39.8
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 4.8e-13 79.0 46 78.3
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 4.1e-12 75.9 46 76.1
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 1.2e-11 74.3 155 42.6
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.0e-11 73.6 46 80.4
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 3.5e-11 72.8 45 77.8
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 1.3e-10 70.9 145 37.2
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 2.9e-10 69.7 134 43.3
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 9.4e-09 64.7 130 36.2
Cre11.g477250 Chlamydomonas reinhardtii HOM05D006141 ORTHO05D007670 6.8e-07 58.5 99 39.4
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.8e-07 58.5 95 45.3
MCO02G477 Micromonas commoda HOM05D006141 ORTHO05D007670 1.2e-06 57.8 152 30.9


User provided reference genes

Program Settings