Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01399 Erythranthe guttata HOM05D004360 ORTHO05D005195 1.2e-92 343.2 176 100.0
SGA_v2.0_scaffold118G32638 Striga asiatica HOM05D004360 ORTHO05D005195 1.7e-62 243.0 191 71.2
MSTRG.1609 Avicennia marina HOM05D004360 ORTHO05D005195 8.3e-62 240.7 191 69.6
Lj7A416T39 Lonicera japonica HOM05D004360 ORTHO05D005195 1.3e-54 216.9 173 66.5
Oeu020627.1 Olea europaea HOM05D004360 ORTHO05D005195 1.1e-53 213.8 168 69.0
Oeu028624.1 Olea europaea HOM05D004360 ORTHO05D005195 1.1e-53 213.8 192 62.5
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla HOM05D004360 ORTHO05D005195 5.4e-53 211.5 173 66.5
Medtr3g006190 Medicago truncatula HOM05D004360 ORTHO05D005195 3.5e-52 208.8 170 65.3
GSVIVG01037160001 Vitis vinifera HOM05D004360 ORTHO05D005195 5.9e-52 208.0 165 68.5
PGSC0003DMG400006668 Solanum tuberosum HOM05D004360 ORTHO05D005195 7.8e-52 207.6 132 76.5
TWI12G0674 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 7.8e-52 207.6 174 64.9
unitig_8.g4904 Utricularia gibba HOM05D004360 ORTHO05D005195 7.8e-52 207.6 174 62.6
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea HOM05D004360 ORTHO05D005195 1.3e-51 206.8 168 66.1
DCAR_014061 Daucus carota HOM05D004360 ORTHO05D005195 1.3e-51 206.8 174 61.5
CSS0027083 Camellia sinensis var. sinensis HOM05D004360 ORTHO05D005195 1.7e-51 206.5 166 68.7
Nitab4.5_0007335g0050 Nicotiana tabacum HOM05D004360 ORTHO05D005195 1.7e-51 206.5 180 62.2
Actinidia01542 Actinidia chinensis HOM05D004360 ORTHO05D005195 3.0e-51 205.7 179 63.7
Sopen11g020480 Solanum pennellii HOM05D004360 ORTHO05D005195 5.0e-51 204.9 132 75.8
TPR.G25525 Trifolium pratense HOM05D004360 ORTHO05D005195 8.6e-51 204.1 171 64.3
Manes.02G202700 Manihot esculenta HOM05D004360 ORTHO05D005195 1.1e-50 203.8 181 63.0
Peaxi162Scf00818g00320 Petunia axillaris HOM05D004360 ORTHO05D005195 1.1e-50 203.8 174 63.2
Phvul.005G002300 Phaseolus vulgaris HOM05D004360 ORTHO05D005195 1.5e-50 203.4 163 67.5
Solyc11g045030.2 Solanum lycopersicum HOM05D004360 ORTHO05D005195 1.5e-50 203.4 193 59.1
VMungo1080G0197 Vigna mungo HOM05D004360 ORTHO05D005195 1.5e-50 203.4 162 67.9
Cc10_g16090 Coffea canephora HOM05D004360 ORTHO05D005195 5.6e-50 201.4 177 61.6
COL.COLO4_25070 Corchorus olitorius HOM05D004360 ORTHO05D005195 7.3e-50 201.1 166 66.3
Manes.18G109100 Manihot esculenta HOM05D004360 ORTHO05D005195 7.3e-50 201.1 163 67.5
Lj3g0027106 Lotus japonicus HOM05D004360 ORTHO05D005195 9.5e-50 200.7 167 63.5
Psat5g232320 Pisum sativum HOM05D004360 ORTHO05D005195 9.5e-50 200.7 183 61.2
Glyma.04G110500 Glycine max HOM05D004360 ORTHO05D005195 1.2e-49 200.3 165 66.7
Glyma.06G323900 Glycine max HOM05D004360 ORTHO05D005195 1.6e-49 199.9 165 66.1
Lalb_Chr18g0048451 Lupinus albus HOM05D004360 ORTHO05D005195 1.6e-49 199.9 169 64.5
QL09p001278 Quercus lobata HOM05D004360 ORTHO05D005195 1.6e-49 199.9 166 65.1
A02p26710 Brassica napus HOM05D004360 ORTHO05D005195 2.8e-49 199.1 164 67.1
BraA02t07674Z Brassica rapa HOM05D004360 ORTHO05D005195 2.8e-49 199.1 164 67.1
CANSAT56G1596 Cannabis sativa HOM05D004360 ORTHO05D005195 2.8e-49 199.1 171 64.3
CARHR261230 Cardamine hirsuta HOM05D004360 ORTHO05D005195 2.8e-49 199.1 162 67.9
Nn5g27232 Nelumbo nucifera HOM05D004360 ORTHO05D005195 2.8e-49 199.1 166 63.3
BcaC03g16418 Brassica carinata HOM05D004360 ORTHO05D005195 3.6e-49 198.7 124 79.8
C02p42460 Brassica napus HOM05D004360 ORTHO05D005195 3.6e-49 198.7 124 79.8
MBI03_g07140_MAGBIO Magnolia biondii HOM05D004360 ORTHO05D005195 4.7e-49 198.4 165 64.8
Nitab4.5_0007657g0070 Nicotiana tabacum HOM05D004360 ORTHO05D005195 6.2e-49 198.0 187 59.4
BcaB05g23914 Brassica carinata HOM05D004360 ORTHO05D005195 8.0e-49 197.6 164 66.5
Carub.0001s3168 Capsella rubella HOM05D004360 ORTHO05D005195 8.0e-49 197.6 125 78.4
Thhalv10029009m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 8.0e-49 197.6 165 65.5
THA.LOC104806751 Tarenaya hassleriana HOM05D004360 ORTHO05D005195 8.0e-49 197.6 122 79.5
AL6G43950 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 1.1e-48 197.2 122 80.3
CsaV3_2G033320 Cucumis sativus L. HOM05D004360 ORTHO05D005195 1.4e-48 196.8 162 67.3
Sp6g07270 Schrenkiella parvula HOM05D004360 ORTHO05D005195 1.4e-48 196.8 122 80.3
Hund16918 Selenicereus undatus HOM05D004360 ORTHO05D005195 1.4e-48 196.8 169 62.1
Eucgr.F04085 Eucalyptus grandis HOM05D004360 ORTHO05D005195 1.8e-48 196.4 172 60.5
PGSC0003DMG400033136 Solanum tuberosum HOM05D004360 ORTHO05D005195 1.8e-48 196.4 132 72.7
BcaC08g43849 Brassica carinata HOM05D004360 ORTHO05D005195 2.3e-48 196.1 122 79.5
A09p32780 Brassica napus HOM05D004360 ORTHO05D005195 2.3e-48 196.1 122 79.5
C06p12320 Brassica napus HOM05D004360 ORTHO05D005195 2.3e-48 196.1 122 79.5
BolC6t36383H Brassica oleracea HOM05D004360 ORTHO05D005195 2.3e-48 196.1 122 79.5
BraA09t38813Z Brassica rapa HOM05D004360 ORTHO05D005195 2.3e-48 196.1 122 79.5
Sed0002471 Sechium edule HOM05D004360 ORTHO05D005195 4.0e-48 195.3 162 67.3
AT4G10140 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 6.8e-48 194.5 122 79.5
A09p28790 Brassica napus HOM05D004360 ORTHO05D005195 6.8e-48 194.5 122 79.5
CiPaw.03G012600 Carya illinoinensis HOM05D004360 ORTHO05D005195 6.8e-48 194.5 123 77.2
Prupe.8G003400 Prunus persica HOM05D004360 ORTHO05D005195 6.8e-48 194.5 167 64.1
MELO3C008103.2 Cucumis melo HOM05D004360 ORTHO05D005195 8.9e-48 194.1 161 67.1
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 8.9e-48 194.1 166 65.1
TAR628G1251 Trochodendron aralioides HOM05D004360 ORTHO05D005195 8.9e-48 194.1 163 64.4
CARHR032930 Cardamine hirsuta HOM05D004360 ORTHO05D005195 1.2e-47 193.7 129 75.2
Potri.013G095200 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.2e-47 193.7 181 59.7
Rhsim12G0001800 Rhododendron simsii HOM05D004360 ORTHO05D005195 1.2e-47 193.7 131 72.5
CDE08G1539 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 1.5e-47 193.4 121 78.5
Potri.003G048300 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.5e-47 193.4 175 62.9
BcaB07g32992 Brassica carinata HOM05D004360 ORTHO05D005195 2.0e-47 193.0 122 79.5
Gohir.A05G248500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 2.0e-47 193.0 166 63.3
Gohir.D05G250900 Gossypium hirsutum HOM05D004360 ORTHO05D005195 2.0e-47 193.0 166 63.3
Gorai.009G262300 Gossypium raimondii HOM05D004360 ORTHO05D005195 2.0e-47 193.0 166 63.3
Solyc06g064450.3 Solanum lycopersicum HOM05D004360 ORTHO05D005195 2.0e-47 193.0 132 72.0
Sopen06g022920 Solanum pennellii HOM05D004360 ORTHO05D005195 2.0e-47 193.0 132 72.0
Carub.0006s2871 Capsella rubella HOM05D004360 ORTHO05D005195 2.6e-47 192.6 172 61.6
CAN.G970.20 Capsicum annuum HOM05D004360 ORTHO05D005195 2.6e-47 192.6 132 72.7
Sabra13G0081200 Salix brachista HOM05D004360 ORTHO05D005195 2.6e-47 192.6 121 76.9
AL1G47880 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 3.4e-47 192.2 122 77.9
ClCG11G008280 Citrullus lanatus HOM05D004360 ORTHO05D005195 3.4e-47 192.2 161 66.5
PGR083G1110 Punica granatum HOM05D004360 ORTHO05D005195 4.4e-47 191.8 172 62.2
Sp1g28930 Schrenkiella parvula HOM05D004360 ORTHO05D002912 4.4e-47 191.8 124 77.4
AT1G33490 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 5.8e-47 191.4 120 78.3
BraA09t38441Z Brassica rapa HOM05D004360 ORTHO05D005195 7.5e-47 191.0 153 68.0
Sc06g0000070 Simmondsia chinensis HOM05D004360 ORTHO05D005195 7.5e-47 191.0 122 73.8
CAN.G14.46 Capsicum annuum HOM05D004360 ORTHO05D005195 9.8e-47 190.7 132 72.0
MD05G1006100 Malus domestica HOM05D004360 ORTHO05D005195 9.8e-47 190.7 171 61.4
MD10G1002100 Malus domestica HOM05D004360 ORTHO05D005195 1.3e-46 190.3 172 61.0
Peaxi162Scf00078g00103 Petunia axillaris HOM05D004360 ORTHO05D005195 1.3e-46 190.3 193 56.5
Actinidia29366 Actinidia chinensis HOM05D004360 ORTHO05D005195 1.7e-46 189.9 201 55.2
Haze_14005 Corylus avellana HOM05D004360 ORTHO05D005195 1.7e-46 189.9 119 79.8
ATR1089G020 Amborella trichopoda HOM05D004360 ORTHO05D005195 2.2e-46 189.5 126 73.0
Aa31LG6G7960 Aethionema arabicum HOM05D004360 ORTHO05D005195 2.9e-46 189.1 121 77.7
Thhalv10008879m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 4.9e-46 188.3 122 77.0
C09p36560 Brassica napus HOM05D004360 ORTHO05D005195 8.3e-46 187.6 120 79.2
Duzib116G0205 Durio zibethinus HOM05D004360 ORTHO05D005195 1.4e-45 186.8 123 75.6
FvH4_2g00310 Fragaria vesca HOM05D004360 ORTHO05D005195 1.4e-45 186.8 165 62.4
Duzib116G0053 Durio zibethinus HOM05D004360 ORTHO05D005195 1.9e-45 186.4 170 60.6
FAN20G2250 Fragaria x ananassa HOM05D004360 ORTHO05D005195 1.9e-45 186.4 165 63.0
HanXRQChr12g0369241 Helianthus annuus HOM05D004360 ORTHO05D005195 2.4e-45 186.0 125 72.0
Sed0011254 Sechium edule HOM05D004360 ORTHO05D005195 2.4e-45 186.0 122 74.6
Lsat_1_v5_gn_1_24560 Lactuca sativa HOM05D004360 ORTHO05D005195 3.2e-45 185.7 125 71.2
Aa31LG9G11860 Aethionema arabicum HOM05D004360 ORTHO05D005195 4.1e-45 185.3 142 69.7
BolC9t56489H Brassica oleracea HOM05D004360 ORTHO05D005195 7.0e-45 184.5 151 67.5
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 7.0e-45 184.5 130 66.9
Ciclev10022474m.g Citrus clementina HOM05D004360 ORTHO05D005195 9.2e-45 184.1 124 74.2
PSO210G5265 Papaver somniferum HOM05D004360 ORTHO05D005195 9.2e-45 184.1 162 63.0
PSO761G0584 Papaver somniferum HOM05D004360 ORTHO05D005195 9.2e-45 184.1 162 63.0
Os05g0105500 Oryza sativa ssp. japonica HOM05D004360 ORTHO05D005195 1.6e-44 183.3 121 71.1
AUR62013395 Chenopodium quinoa HOM05D004360 ORTHO05D005195 3.5e-44 182.2 126 69.8
AUR62038546 Chenopodium quinoa HOM05D004360 ORTHO05D005195 6.0e-44 181.4 126 69.0
RcHm_v2.0_Chr6g0249591 Rosa chinensis HOM05D004360 ORTHO05D005195 6.0e-44 181.4 121 74.4
Aqoxy5G01853 Aquilegia oxysepala HOM05D004360 ORTHO05D005195 3.9e-43 178.7 124 72.6
HPP92_001197 Vanilla planifolia HOM05D004360 ORTHO05D005195 3.9e-43 178.7 121 69.4
AUR62038559 Chenopodium quinoa HOM05D004360 ORTHO05D005195 5.0e-43 178.3 126 68.3
Gohir.A08G229200 Gossypium hirsutum HOM05D004360 ORTHO05D005195 6.6e-43 177.9 125 70.4
Gohir.D08G249500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 6.6e-43 177.9 125 70.4
Gorai.004G266100 Gossypium raimondii HOM05D004360 ORTHO05D005195 6.6e-43 177.9 125 70.4
Atru.chr13.2581 Acer truncatum HOM05D004360 ORTHO05D005195 8.6e-43 177.6 121 71.1
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea HOM05D004360 ORTHO05D005195 8.6e-43 177.6 148 66.9
EL10Ac1g01286 Beta vulgaris HOM05D004360 ORTHO05D005195 8.6e-43 177.6 124 69.4
Lalb_Chr01g0008181 Lupinus albus HOM05D004360 ORTHO05D005195 2.5e-42 176.0 124 68.5
HPP92_009217 Vanilla planifolia HOM05D004360 ORTHO05D005195 5.6e-42 174.9 124 67.7
TWI18G1157 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 7.3e-42 174.5 167 59.9
ECA247G3060 Erigeron canadensis HOM05D004360 ORTHO05D005195 9.5e-42 174.1 125 68.8
HanXRQChr08g0226271 Helianthus annuus HOM05D004360 ORTHO05D005195 9.5e-42 174.1 133 63.9
Nitab4.5_0000079g0160 Nicotiana tabacum HOM05D004360 ORTHO05D005195 1.6e-41 173.3 197 53.8
SEGI_09604 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 2.8e-41 172.6 126 64.3
BolC2t10286H Brassica oleracea HOM05D004360 ORTHO05D005195 4.7e-41 171.8 146 66.4
CDE02G3351 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 6.2e-41 171.4 107 81.3
Medtr4g030060 Medicago truncatula HOM05D004360 ORTHO05D005195 6.2e-41 171.4 161 59.0
Psat7g229800 Pisum sativum HOM05D004360 ORTHO05D005195 3.1e-40 169.1 124 66.9
BcaC04g21022 Brassica carinata HOM05D004360 ORTHO05D005195 6.8e-40 167.9 111 76.6
Lsat_1_v5_gn_6_109600 Lactuca sativa HOM05D004360 ORTHO05D005195 8.9e-40 167.5 133 63.2
HanXRQChr05g0150501 Helianthus annuus HOM05D004360 ORTHO05D005195 3.4e-39 165.6 124 62.9
Zm00001eb207120 Zea mays HOM05D004360 ORTHO05D005195 4.9e-38 161.8 126 61.1
Zm00001eb289060 Zea mays HOM05D004360 ORTHO05D005195 4.1e-37 158.7 126 61.1
SMO143G0101 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 4.6e-36 155.2 127 56.7
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis HOM05D004360 ORTHO05D005195 6.6e-35 151.4 121 61.2
Pp3c17_19860 Physcomitrium patens HOM05D004360 ORTHO05D005195 2.1e-33 146.4 124 58.1
Pp3c23_11640 Physcomitrium patens HOM05D004360 ORTHO05D005195 2.8e-33 146.0 121 58.7
BcaB01g01455 Brassica carinata HOM05D004360 ORTHO05D005195 1.1e-32 144.1 86 81.4
BcaB01g01456 Brassica carinata HOM05D004360 ORTHO05D005195 2.6e-31 139.4 155 56.1
Mapoly0022s0158 Marchantia polymorpha HOM05D004360 ORTHO05D005195 3.8e-30 135.6 167 43.7
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 7.1e-29 131.3 115 65.2
SMO356G0006 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 1.2e-28 130.6 119 52.9
CBR_g61487 Chara braunii HOM05D004360 ORTHO05D005195 6.0e-28 128.3 124 50.0
SHI16862 Sapria himalayana HOM05D004360 ORTHO05D005195 6.0e-28 128.3 82 78.0
Ah.05g170480 Amaranthus hybridus HOM05D004360 ORTHO05D005195 1.0e-27 127.5 122 59.8
SEGI_01847 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 3.0e-27 125.9 192 38.5
PSO210G7326 Papaver somniferum HOM05D004360 ORTHO05D005195 5.6e-26 121.7 123 58.5
TPR.G4421 Trifolium pratense HOM05D004360 ORTHO05D001407 3.1e-24 115.9 82 69.5
unitig_578.g16114 Utricularia gibba HOM05D004360 ORTHO05D005195 7.1e-21 104.8 108 54.6
HanXRQChr09g0244511 Helianthus annuus HOM05D004360 ORTHO05D005195 7.8e-20 101.3 90 58.9
ECA246G3009 Erigeron canadensis HOM05D004360 ORTHO05D005195 4.5e-15 85.5 59 67.8
TAR375G0667 Trochodendron aralioides HOM05D004360 ORTHO05D005195 5.8e-15 85.1 71 60.6
FAN24G1049 Fragaria x ananassa HOM05D004360 ORTHO05D005195 1.0e-11 74.3 163 36.8
Dinv02982 Davidia involucrata HOM05D004360 ORTHO05D005195 1.8e-11 73.6 46 80.4
Dinv17160 Davidia involucrata HOM05D004360 ORTHO05D005195 1.8e-11 73.6 46 80.4
Dinv04074 Davidia involucrata HOM05D004360 ORTHO05D005195 8.7e-11 71.2 47 76.6
Dinv08764 Davidia involucrata HOM05D004360 ORTHO05D005195 2.5e-10 69.7 46 73.9
arahy.Tifrunner.gnm1.ann1.B7FYB2 Arachis hypogaea HOM05D001689 ORTHO05D001643 3.7e-09 65.9 44 70.5
TPR.G39583 Trifolium pratense HOM05D004360 ORTHO05D005195 3.7e-09 65.9 46 60.9


User provided reference genes

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