Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 4.1e-184 647.9 322 100.0
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 5.1e-134 481.5 331 73.1
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 4.2e-128 461.8 309 73.8
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.6e-124 449.9 313 70.6
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 2.1e-124 449.5 328 68.6
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 1.9e-120 436.4 308 69.5
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.1e-119 433.0 297 70.4
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 7.9e-119 431.0 322 66.8
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 7.9e-119 431.0 280 74.3
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.0e-118 430.6 305 69.8
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 1.8e-118 429.9 319 67.7
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 3.3e-117 425.6 332 65.4
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 2.2e-116 422.9 313 66.1
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 2.8e-116 422.5 315 65.4
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 3.7e-116 422.2 311 66.2
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 8.2e-116 421.0 298 69.5
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 1.4e-115 420.2 295 69.5
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 3.1e-115 419.1 311 65.3
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 4.1e-115 418.7 298 65.8
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 2.6e-114 416.0 324 64.5
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 2.6e-114 416.0 310 66.5
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 2.6e-114 416.0 324 63.3
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 8.5e-113 411.0 292 68.2
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 2.5e-112 409.5 297 64.3
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 3.2e-112 409.1 317 63.1
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 7.2e-112 407.9 317 62.5
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 9.4e-112 407.5 330 62.7
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 2.7e-111 406.0 317 64.4
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 2.3e-110 402.9 306 65.4
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 3.0e-110 402.5 298 65.1
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 3.0e-110 402.5 308 63.0
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 3.9e-110 402.1 318 62.9
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 2.0e-109 399.8 303 66.0
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 3.3e-109 399.1 307 61.6
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 7.4e-109 397.9 303 63.7
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 9.7e-109 397.5 306 64.1
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 9.7e-109 397.5 315 64.4
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 1.7e-108 396.7 306 64.4
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 2.8e-108 396.0 306 64.1
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 4.8e-108 395.2 321 63.2
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 4.8e-108 395.2 305 62.6
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 1.4e-107 393.7 287 67.9
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.8e-107 393.3 306 63.4
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 3.1e-107 392.5 310 62.6
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 1.5e-106 390.2 306 62.7
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 2.6e-106 389.4 306 63.4
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 5.9e-106 388.3 306 62.4
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 7.7e-106 387.9 306 63.4
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 7.7e-106 387.9 265 69.4
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 1.0e-105 387.5 302 62.6
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 1.0e-105 387.5 359 61.8
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 1.3e-105 387.1 317 62.8
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.5e-105 384.4 275 68.0
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 1.1e-104 384.0 300 64.0
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.1e-104 384.0 331 58.3
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 2.5e-104 382.9 317 62.1
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 5.5e-104 381.7 306 61.1
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 2.7e-103 379.4 377 54.1
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 6.1e-103 378.3 317 59.6
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 6.1e-103 378.3 315 59.4
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 2.3e-102 376.3 297 59.9
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.9e-102 375.6 303 61.7
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 3.9e-102 375.6 286 65.4
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 2.0e-101 373.2 317 59.0
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 2.0e-101 373.2 321 58.9
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 2.2e-100 369.8 314 57.0
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 3.7e-100 369.0 301 58.8
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.2e-98 364.0 298 63.8
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.5e-96 356.3 247 70.0
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 4.7e-95 352.1 247 69.2
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 4.7e-95 352.1 306 57.2
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 3.3e-93 345.9 291 60.8
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.8e-91 340.1 291 60.1
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 2.7e-90 336.3 305 54.8
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 1.7e-89 333.6 323 51.7
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 1.1e-88 330.9 294 57.1
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 2.1e-87 326.6 323 55.4
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 6.3e-84 315.1 323 50.5
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 5.7e-77 292.0 206 68.9
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.2e-74 284.3 271 57.2
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 3.5e-74 282.7 203 67.0
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 4.5e-74 282.3 214 64.0
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 1.0e-73 281.2 203 66.0
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.0e-73 281.2 270 57.8
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.7e-73 280.4 307 45.0
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 2.3e-70 270.0 239 59.8
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 3.2e-67 259.6 208 58.7
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 7.0e-67 258.5 203 58.6
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.0e-57 226.5 171 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 3.6e-55 219.5 318 40.6
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 8.3e-52 208.4 292 43.8
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 2.1e-47 193.7 182 56.6
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 8.9e-46 188.3 288 39.9
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 2.4e-43 180.3 120 68.3
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 2.1e-42 177.2 168 56.0
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 6.6e-41 172.2 209 42.1
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 1.6e-39 167.5 110 74.5
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 1.9e-35 154.1 300 31.7
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.6e-34 151.0 120 64.2
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 2.7e-34 150.2 124 57.3
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 8.7e-33 145.2 94 70.2
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.3e-31 141.4 117 59.8
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 7.6e-29 132.1 89 69.7
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 2.9e-28 130.2 178 45.5
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 2.4e-27 127.1 80 62.5
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.9e-25 119.8 72 79.2
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.1e-24 118.2 72 77.8
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 9.6e-24 115.2 82 63.4
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 5.3e-22 109.4 155 34.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 1.4e-19 101.3 285 25.6
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 6.0e-18 95.9 77 57.1
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 6.7e-17 92.4 65 64.6
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-13 81.3 152 36.8
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.5e-13 81.3 152 36.8
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.6e-13 79.0 152 36.2
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 2.1e-10 70.9 152 37.5
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.7e-10 70.5 42 83.3
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 1.3e-09 68.2 218 26.6
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 5.3e-06 56.2 43 65.1
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 6.9e-06 55.8 38 73.7


User provided reference genes

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