Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 3.4e-68 261.5 132 100.0
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 2.5e-31 139.0 95 67.4
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 5.7e-31 137.9 96 67.7
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 3.7e-30 135.2 94 66.0
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 1.8e-29 132.9 103 58.3
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 9.1e-29 130.6 118 53.4
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 1.2e-28 130.2 99 62.6
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 2.6e-28 129.0 97 59.8
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 3.4e-28 128.6 94 62.8
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 5.9e-28 127.9 118 52.5
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-27 126.7 118 52.5
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-27 126.7 128 50.8
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.7e-27 126.3 88 63.6
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 6.5e-27 124.4 88 62.5
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 8.5e-27 124.0 95 57.9
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 1.1e-26 123.6 103 54.4
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 1.4e-26 123.2 91 60.4
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 3.2e-26 122.1 122 49.2
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 4.2e-26 121.7 90 57.8
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 5.5e-26 121.3 99 56.6
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 7.2e-26 120.9 96 54.2
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 1.2e-25 120.2 126 46.8
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 6.1e-25 117.9 90 60.0
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 1.0e-24 117.1 93 59.1
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.4e-24 116.7 88 60.2
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 1.4e-24 116.7 130 46.9
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 1.8e-24 116.3 98 51.0
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 1.8e-24 116.3 81 69.1
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 3.0e-24 115.5 94 57.4
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 3.9e-24 115.2 117 48.7
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 5.1e-24 114.8 93 54.8
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 6.7e-24 114.4 115 47.0
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 6.7e-24 114.4 116 47.4
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 6.7e-24 114.4 89 53.9
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 8.8e-24 114.0 136 48.5
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 8.8e-24 114.0 93 53.8
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 2.6e-23 112.5 89 52.8
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 3.3e-23 112.1 93 53.8
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 3.3e-23 112.1 93 53.8
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 5.7e-23 111.3 104 51.0
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 1.7e-22 109.8 91 53.8
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.7e-22 109.8 103 48.5
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 1.7e-22 109.8 103 51.5
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 3.7e-22 108.6 105 48.6
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 1.4e-21 106.7 79 63.3
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 1.8e-21 106.3 92 54.3
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 3.1e-21 105.5 90 48.9
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 3.1e-21 105.5 99 50.5
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 4.1e-21 105.1 94 51.1
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 6.9e-21 104.4 104 49.0
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.2e-20 103.6 96 50.0
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.2e-20 103.6 90 50.0
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 2.6e-20 102.4 118 42.4
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 6.5e-19 97.8 101 46.5
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 6.5e-19 97.8 92 51.1
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 1.1e-18 97.1 98 49.0
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 9.4e-18 94.0 74 59.5
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 1.2e-17 93.6 123 43.1
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 3.6e-17 92.0 63 63.5
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 6.1e-17 91.3 56 67.9
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 8.0e-17 90.9 56 66.1
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 8.0e-17 90.9 56 66.1
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 8.0e-17 90.9 55 65.5
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.0e-16 90.5 50 72.0
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 1.4e-16 90.1 68 58.8
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 1.8e-16 89.7 60 61.7
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 3.0e-16 89.0 56 64.3
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 8.8e-16 87.4 56 62.5
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 1.1e-15 87.0 57 61.4
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 1.5e-15 86.7 157 33.8
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 2.0e-15 86.3 68 54.4
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 4.4e-15 85.1 49 75.5
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 1.3e-14 83.6 74 48.6
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 4.8e-14 81.6 93 43.0
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 1.1e-13 80.5 62 54.8
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 1.4e-13 80.1 79 49.4
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 1.8e-13 79.7 56 60.7
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 5.3e-13 78.2 67 46.3
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 4.5e-12 75.1 76 50.0
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 7.7e-12 74.3 74 47.3
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 5.0e-11 71.6 71 43.7
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 9.4e-10 67.4 69 47.8
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 3.6e-09 65.5 42 59.5
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.0e-08 63.9 36 69.4
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 4.0e-08 62.0 37 64.9
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 9.7e-07 57.4 69 34.8


User provided reference genes

Program Settings