Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 3.3e-156 555.1 289 100.0
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 6.0e-118 427.9 290 75.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 4.3e-116 421.8 289 74.7
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.2e-111 405.2 289 71.6
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 7.9e-110 401.0 289 70.9
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 4.3e-108 395.2 289 69.9
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 6.2e-107 391.3 289 69.6
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 5.8e-105 384.8 300 71.0
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 3.8e-104 382.1 250 76.4
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 4.9e-104 381.7 243 77.0
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 4.9e-104 381.7 243 77.0
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 6.4e-104 381.3 289 72.0
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.4e-104 381.3 249 75.9
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 6.4e-104 381.3 249 75.9
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.4e-104 380.9 251 74.9
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.1e-103 380.6 295 67.1
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.1e-103 380.6 256 74.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 1.9e-103 379.8 292 68.8
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 3.2e-103 379.0 345 62.9
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 4.2e-103 378.6 283 69.6
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.2e-103 378.6 292 68.2
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 5.5e-103 378.3 272 71.7
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 5.5e-103 378.3 244 75.8
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 7.1e-103 377.9 234 79.1
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 9.3e-103 377.5 250 75.2
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.3e-103 377.5 264 73.5
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.6e-102 376.7 286 69.6
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 2.1e-102 376.3 283 68.2
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 3.5e-102 375.6 270 70.4
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 6.0e-102 374.8 282 69.1
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 6.0e-102 374.8 250 74.4
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 7.9e-102 374.4 290 67.2
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 1.0e-101 374.0 279 68.5
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 1.3e-101 373.6 241 76.8
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.8e-101 373.2 284 69.7
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.1e-100 370.5 236 75.0
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.5e-100 370.2 289 68.5
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.5e-100 370.2 318 63.8
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.5e-100 370.2 296 67.6
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.9e-100 369.8 233 79.0
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.9e-100 369.8 234 76.1
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.5e-100 369.4 283 67.1
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 2.5e-100 369.4 234 76.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 3.3e-100 369.0 214 82.7
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 3.3e-100 369.0 263 71.5
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.3e-100 369.0 233 79.0
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 5.6e-100 368.2 265 72.5
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 9.6e-100 367.5 235 76.6
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 9.6e-100 367.5 292 66.8
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.6e-99 366.7 243 73.7
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 2.1e-99 366.3 261 70.9
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 2.1e-99 366.3 263 70.7
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 3.7e-99 365.5 234 78.2
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 4.8e-99 365.2 288 66.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 6.2e-99 364.8 254 73.2
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 8.2e-99 364.4 292 66.1
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 8.2e-99 364.4 281 68.3
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 8.2e-99 364.4 284 66.9
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.4e-98 363.6 263 70.3
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 1.4e-98 363.6 293 66.6
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 1.4e-98 363.6 233 75.5
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 1.8e-98 363.2 294 66.7
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.8e-98 363.2 264 69.3
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 3.1e-98 362.5 288 66.7
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 3.1e-98 362.5 272 70.6
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 4.0e-98 362.1 234 74.4
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 4.0e-98 362.1 284 67.6
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 6.9e-98 361.3 272 70.2
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 9.0e-98 360.9 242 75.6
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 1.2e-97 360.5 292 66.8
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 1.2e-97 360.5 286 65.4
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 1.2e-97 360.5 233 74.7
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 2.0e-97 359.8 233 77.7
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 2.6e-97 359.4 304 64.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 2.6e-97 359.4 262 69.8
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 3.4e-97 359.0 300 66.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 5.8e-97 358.2 209 81.8
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 7.6e-97 357.8 209 80.4
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 1.7e-96 356.7 253 72.7
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 2.2e-96 356.3 213 79.3
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.9e-96 355.9 268 66.8
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 4.9e-96 355.1 296 65.5
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.1e-95 354.0 290 65.9
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.4e-95 353.6 261 69.3
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.4e-95 353.6 261 69.3
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 3.2e-95 352.4 274 67.9
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 5.5e-95 351.7 249 68.3
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 5.5e-95 351.7 249 68.3
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.1e-95 351.3 283 65.4
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.6e-94 350.1 285 65.6
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 3.5e-94 349.0 282 66.7
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 4.6e-94 348.6 255 69.0
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.8e-93 346.7 281 63.7
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 5.1e-93 345.1 253 72.3
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 6.7e-93 344.7 315 59.7
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 2.5e-87 326.2 231 68.0
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 9.4e-87 324.3 211 75.4
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 4.6e-86 322.0 243 65.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 4.2e-79 298.9 235 65.5
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.3e-75 287.3 205 64.4
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 4.8e-75 285.4 209 70.3
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.4e-74 283.9 202 64.9
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.4e-74 283.1 300 56.0
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 4.5e-73 278.9 203 64.5
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 7.2e-71 271.6 219 67.6
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 5.3e-66 255.4 195 62.1
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.6e-65 253.1 226 61.1
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.5e-63 245.4 198 63.1
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.2e-36 157.9 239 42.7
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 7.0e-34 148.7 170 49.4
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 4.6e-33 146.0 214 39.7
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 6.6e-32 142.1 91 78.0
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.5e-31 141.0 158 44.9
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 4.3e-31 139.4 197 40.1
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.2e-30 137.9 131 57.3
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 8.3e-27 125.2 94 67.0
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.2e-25 121.3 127 48.0
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.7e-08 64.3 80 43.8
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.8e-06 57.0 84 42.9
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 8.1e-06 55.5 80 36.2


User provided reference genes

Program Settings