Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 5.5e-156 554.3 288 100.0
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 3.2e-111 405.6 290 77.2
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 6.2e-107 391.3 288 74.3
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 1.2e-97 360.5 240 76.7
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 3.4e-97 359.0 255 76.1
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 9.9e-97 357.5 256 75.0
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 6.4e-96 354.8 241 76.8
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 4.2e-95 352.1 235 77.9
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 4.2e-95 352.1 258 73.6
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 7.1e-95 351.3 279 67.0
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 1.2e-94 350.5 287 68.3
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 3.5e-94 349.0 273 70.0
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 1.8e-93 346.7 239 74.1
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 3.0e-93 345.9 247 73.7
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 1.1e-92 344.0 256 72.7
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.9e-92 343.2 252 73.4
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 2.5e-92 342.8 270 68.5
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 4.3e-92 342.0 252 73.4
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 5.6e-92 341.7 274 68.6
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 9.6e-92 340.9 215 82.3
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.8e-91 339.3 238 75.2
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 2.8e-91 339.3 270 68.9
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 4.8e-91 338.6 247 71.7
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 5.3e-90 335.1 288 65.6
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 5.3e-90 335.1 260 70.4
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 6.9e-90 334.7 226 75.7
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 1.5e-89 333.6 210 81.4
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 2.0e-89 333.2 238 75.2
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 2.0e-89 333.2 263 68.4
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 2.0e-89 333.2 201 83.1
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 2.6e-89 332.8 210 79.5
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 2.6e-89 332.8 260 70.0
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 4.5e-89 332.0 264 67.0
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 4.5e-89 332.0 258 69.0
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 5.8e-89 331.6 237 71.7
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 5.8e-89 331.6 261 69.7
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 1.0e-88 330.9 228 74.6
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.0e-88 330.9 236 72.0
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 1.0e-88 330.9 239 71.5
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 1.0e-88 330.9 241 71.8
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 1.3e-88 330.5 236 72.0
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 1.3e-88 330.5 251 69.7
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 1.3e-88 330.5 202 82.7
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 1.3e-88 330.5 274 65.7
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 1.7e-88 330.1 241 73.0
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.2e-88 329.7 271 67.9
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 2.9e-88 329.3 267 67.8
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 2.9e-88 329.3 267 67.8
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 8.4e-88 327.8 213 75.6
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 8.4e-88 327.8 267 66.3
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.9e-87 326.6 272 63.6
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 3.2e-87 325.9 281 61.6
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 4.2e-87 325.5 260 69.2
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 1.2e-86 323.9 288 64.2
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 1.2e-86 323.9 276 64.5
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 7.9e-86 321.2 291 64.3
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 1.0e-85 320.9 209 76.6
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 1.3e-85 320.5 281 64.1
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 1.8e-85 320.1 229 73.8
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 5.1e-85 318.5 271 65.3
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 8.7e-85 317.8 270 65.6
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 1.1e-84 317.4 277 63.9
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 1.5e-84 317.0 270 65.9
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 1.9e-84 316.6 209 78.0
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 5.7e-84 315.1 202 80.7
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 7.4e-84 314.7 222 73.4
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 1.3e-83 313.9 214 76.2
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 2.1e-83 313.2 277 65.7
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.8e-83 312.8 202 80.2
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 2.8e-83 312.8 265 63.8
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 2.8e-83 312.8 260 65.8
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 4.8e-83 312.0 267 64.8
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 6.3e-83 311.6 267 64.4
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 8.2e-83 311.2 248 67.3
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 1.1e-82 310.8 209 76.1
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.4e-82 310.5 234 70.5
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 6.9e-82 308.1 212 74.1
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 9.0e-82 307.8 215 73.0
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 1.2e-81 307.4 201 77.6
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.0e-81 306.6 279 64.5
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 3.4e-81 305.8 274 64.2
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.0e-80 304.3 276 63.8
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 1.0e-80 304.3 253 64.8
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 8.5e-80 301.2 280 62.1
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 8.5e-80 301.2 235 67.2
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 1.1e-79 300.8 207 74.9
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 1.1e-79 300.8 253 65.2
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 2.5e-79 299.7 207 76.3
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 2.5e-79 299.7 203 76.4
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 3.2e-79 299.3 204 76.5
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 4.2e-79 298.9 217 73.3
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 5.5e-79 298.5 204 76.5
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 7.2e-79 298.1 204 76.5
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 7.2e-79 298.1 273 60.8
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 2.1e-78 296.6 207 74.4
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.7e-78 296.2 226 69.5
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 3.6e-78 295.8 204 76.0
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 3.6e-78 295.8 204 76.0
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 2.3e-77 293.1 208 75.0
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 3.0e-77 292.7 186 82.3
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 3.0e-77 292.7 206 71.8
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 6.7e-77 291.6 182 83.0
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 8.7e-77 291.2 213 72.3
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 1.5e-76 290.4 208 74.5
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 9.7e-76 287.7 193 77.7
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 1.8e-74 283.5 202 71.8
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 1.5e-73 280.4 229 64.6
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 1.5e-73 280.4 200 72.0
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 4.5e-73 278.9 227 65.2
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 1.3e-72 277.3 209 70.8
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 2.2e-72 276.6 244 59.0
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 5.0e-72 275.4 196 71.4
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 5.0e-72 275.4 208 67.8
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 1.4e-71 273.9 177 78.5
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 2.7e-70 269.6 177 78.5
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 6.1e-70 268.5 199 69.8
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 7.9e-70 268.1 202 66.8
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 1.8e-69 266.9 200 68.0
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 2.6e-68 263.1 260 57.3
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 4.1e-66 255.8 264 56.4
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 3.4e-65 252.7 179 70.9
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 2.5e-63 246.5 184 71.7
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 1.2e-62 244.2 270 55.6
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 4.7e-62 242.3 165 73.3
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 4.7e-62 242.3 165 73.3
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 3.0e-61 239.6 271 55.4
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 3.7e-59 232.6 211 57.3
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 6.3e-59 231.9 212 57.1
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 8.2e-59 231.5 222 54.1
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 5.3e-58 228.8 200 65.0
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 7.7e-57 224.9 186 65.6
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 4.0e-53 212.6 269 48.3
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 1.6e-49 200.7 132 72.7
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 7.2e-47 191.8 111 82.9
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 3.6e-46 189.5 192 58.9
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.8e-42 177.2 175 53.7
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 7.0e-42 175.3 226 48.2
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 4.5e-41 172.6 211 45.5
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 2.9e-40 169.9 113 76.1
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 4.0e-37 159.5 95 84.2
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.5e-31 140.2 88 76.1
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 3.3e-31 139.8 148 54.7
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 4.9e-27 125.9 195 44.1
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 2.3e-24 117.1 199 37.2
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 4.3e-23 112.8 211 35.1
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 7.3e-23 112.1 234 35.9
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 1.2e-20 104.8 136 45.6
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 2.6e-20 103.6 70 71.4
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 7.5e-20 102.1 208 34.6
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 2.7e-17 93.6 169 36.7
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 2.5e-15 87.0 201 32.8
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 2.8e-14 83.6 66 63.6
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 1.4e-13 81.3 113 47.8
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 1.3e-11 74.7 65 60.0
MBI06_g06479_MAGBIO Magnolia biondii HOM05D001108 ORTHO05D005418 5.4e-10 69.3 71 60.6
BolC9t54441H Brassica oleracea HOM05D001108 ORTHO05D005418 7.8e-09 65.5 38 81.6
Psat0s773g0040 Pisum sativum HOM05D001108 ORTHO05D005418 4.3e-07 59.7 40 75.0
CAN.G10322.1 Capsicum annuum HOM05D001108 ORTHO05D115629 2.8e-06 57.0 45 64.4


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