Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01311 Erythranthe guttata HOM05D004912 ORTHO05D006144 1.5e-87 326.2 172 100.0
Oeu051787.1 Olea europaea HOM05D004912 ORTHO05D006144 3.9e-40 168.7 169 58.6
SalBow7G4664 Salvia bowleyana HOM05D004912 ORTHO05D006144 1.1e-34 150.6 144 59.7
Peaxi162Scf00798g00322 Petunia axillaris HOM05D004912 ORTHO05D006144 2.5e-34 149.4 171 50.9
Nitab4.5_0006163g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 9.7e-31 137.5 170 50.6
PGSC0003DMG400031323 Solanum tuberosum HOM05D004912 ORTHO05D006144 8.2e-30 134.4 168 49.4
Nitab4.5_0005750g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 3.4e-28 129.0 170 47.6
FvH4_5g31970 Fragaria vesca HOM05D004912 ORTHO05D006144 4.5e-28 128.6 175 44.6
FAN04G2666 Fragaria x ananassa HOM05D004912 ORTHO05D006144 5.9e-28 128.3 175 45.7
TAR628G1727 Trochodendron aralioides HOM05D004912 ORTHO05D006144 5.9e-28 128.3 181 48.1
RcHm_v2.0_Chr7g0227991 Rosa chinensis HOM05D004912 ORTHO05D006144 1.0e-27 127.5 172 45.3
Solyc06g065050.2 Solanum lycopersicum HOM05D004912 ORTHO05D006144 1.0e-27 127.5 169 50.3
Sopen06g023560 Solanum pennellii HOM05D004912 ORTHO05D006144 8.5e-27 124.4 169 49.1
FAN18G2258 Fragaria x ananassa HOM05D004912 ORTHO05D006144 5.5e-26 121.7 175 42.9
CAN.G308.42 Capsicum annuum HOM05D004912 ORTHO05D006144 7.2e-26 121.3 141 50.4
Nitab4.5_0001378g0010 Nicotiana tabacum HOM05D004912 ORTHO05D006144 1.6e-25 120.2 142 47.9
Cc10_g10040 Coffea canephora HOM05D004912 ORTHO05D006144 1.0e-24 117.5 149 47.0
Aqoxy6G00063 Aquilegia oxysepala HOM05D004912 ORTHO05D006144 8.7e-24 114.4 190 41.6
Peaxi162Scf00154g00016 Petunia axillaris HOM05D004912 ORTHO05D006144 2.2e-22 109.8 138 50.0
CANSAT25G2909 Cannabis sativa HOM05D004912 ORTHO05D006144 3.7e-22 109.0 191 41.9
HanXRQChr09g0260131 Helianthus annuus HOM05D004912 ORTHO05D006144 1.4e-21 107.1 171 43.9
SGA_v2.0_scaffold118G32511 Striga asiatica HOM05D004912 ORTHO05D006144 1.4e-21 107.1 144 47.9
arahy.Tifrunner.gnm1.ann1.NID8M3 Arachis hypogaea HOM05D004912 ORTHO05D006144 5.3e-21 105.1 171 45.0
Cfa012942 Carpinus fangiana HOM05D004912 ORTHO05D006144 5.3e-21 105.1 174 42.5
Eucgr.F04115 Eucalyptus grandis HOM05D004912 ORTHO05D006144 9.1e-21 104.4 144 41.0
Manes.18G104400 Manihot esculenta HOM05D004912 ORTHO05D006144 1.5e-20 103.6 174 42.5
arahy.Tifrunner.gnm1.ann1.9DDU7S Arachis hypogaea HOM05D004912 ORTHO05D006144 2.0e-20 103.2 171 43.3
Nitab4.5_0007332g0020 Nicotiana tabacum HOM05D004912 ORTHO05D006144 2.0e-20 103.2 130 47.7
vmacro00991 Vaccinium macrocarpon HOM05D004912 ORTHO05D006144 2.0e-20 103.2 174 43.7
Dinv41750 Davidia involucrata HOM05D004912 ORTHO05D006144 7.7e-20 101.3 151 41.7
Psat7g146200 Pisum sativum HOM05D004912 ORTHO05D006144 1.7e-19 100.1 146 43.2
Psat7g146280 Pisum sativum HOM05D004912 ORTHO05D006144 2.2e-19 99.8 146 43.2
Ca_27514_v3 Cicer arietinum L. HOM05D004912 ORTHO05D006144 2.9e-19 99.4 179 39.7
Actinidia01557 Actinidia chinensis HOM05D004912 ORTHO05D006144 6.5e-19 98.2 176 42.0
Medtr4g033230 Medicago truncatula HOM05D004912 ORTHO05D006144 8.5e-19 97.8 151 42.4
Medtr4g033265 Medicago truncatula HOM05D004912 ORTHO05D006144 8.5e-19 97.8 151 42.4
Rhsim12G0007100 Rhododendron simsii HOM05D004912 ORTHO05D006144 8.5e-19 97.8 170 40.0
MD15G1407700 Malus domestica HOM05D004912 ORTHO05D006144 1.1e-18 97.4 177 42.4
Oeu059194.1 Olea europaea HOM05D004912 ORTHO05D006144 3.2e-18 95.9 167 38.3
QL02p026125 Quercus lobata HOM05D004912 ORTHO05D006144 3.2e-18 95.9 138 45.7
arahy.Tifrunner.gnm1.ann1.SX2JAI Arachis hypogaea HOM05D004912 ORTHO05D006144 4.2e-18 95.5 170 43.5
Manes.02G197100 Manihot esculenta HOM05D004912 ORTHO05D006144 4.2e-18 95.5 174 42.5
EL10Ac1g00125 Beta vulgaris HOM05D004912 ORTHO05D006144 5.5e-18 95.1 154 39.6
AUR62022650 Chenopodium quinoa HOM05D004912 ORTHO05D006144 5.5e-18 95.1 153 39.9
Aa31LG4G8550 Aethionema arabicum HOM05D004912 ORTHO05D006144 7.2e-18 94.7 166 36.1
TPR.G312 Trifolium pratense HOM05D004912 ORTHO05D006144 7.2e-18 94.7 145 41.4
Glyma.08G239400 Glycine max HOM05D004912 ORTHO05D006144 1.6e-17 93.6 146 40.4
CAN.G635.17 Capsicum annuum HOM05D004912 ORTHO05D006144 6.1e-17 91.7 137 46.7
arahy.Tifrunner.gnm1.ann1.Z6QD6J Arachis hypogaea HOM05D004912 ORTHO05D006144 7.9e-17 91.3 170 41.8
Ah.05g178460 Amaranthus hybridus HOM05D004912 ORTHO05D006144 1.0e-16 90.9 149 42.3
Carub.0002s1888 Capsella rubella HOM05D004912 ORTHO05D006144 1.4e-16 90.5 160 38.8
Thhalv10018523m.g Eutrema salsugineum HOM05D004912 ORTHO05D006144 2.3e-16 89.7 152 41.4
A02p17660 Brassica napus HOM05D004912 ORTHO05D006144 3.0e-16 89.4 150 40.0
BraA02t06813Z Brassica rapa HOM05D004912 ORTHO05D006144 3.0e-16 89.4 150 40.0
Lsat_1_v5_gn_7_21041 Lactuca sativa HOM05D004912 ORTHO05D006144 3.9e-16 89.0 138 46.4
ECA232G1825 Erigeron canadensis HOM05D004912 ORTHO05D006144 5.1e-16 88.6 146 42.5
Nn5g27542 Nelumbo nucifera HOM05D004912 ORTHO05D006144 5.1e-16 88.6 205 36.1
DCAR_014078 Daucus carota HOM05D004912 ORTHO05D006144 6.7e-16 88.2 151 37.7
VMungo1127G0246 Vigna mungo HOM05D004912 ORTHO05D006144 6.7e-16 88.2 139 41.0
Lj3g0019671 Lotus japonicus HOM05D004912 ORTHO05D006144 1.1e-15 87.4 140 42.9
PGSC0003DMG400031411 Solanum tuberosum HOM05D004912 ORTHO05D006144 1.1e-15 87.4 138 40.6
Lalb_Chr19g0140481 Lupinus albus HOM05D004912 ORTHO05D006144 1.5e-15 87.0 173 35.8
AL2G31720 Arabidopsis lyrata HOM05D004912 ORTHO05D006144 3.3e-15 85.9 146 41.8
Sp5g27160 Schrenkiella parvula HOM05D004912 ORTHO05D006144 3.3e-15 85.9 146 41.1
CDE06G1282 Ceratophyllum demersum HOM05D004912 ORTHO05D006144 4.4e-15 85.5 174 37.4
THA.LOC104800129 Tarenaya hassleriana HOM05D004912 ORTHO05D006144 4.4e-15 85.5 149 38.3
Lj4A484T8 Lonicera japonica HOM05D004912 ORTHO05D006144 5.7e-15 85.1 142 40.8
Sc01g0001930 Simmondsia chinensis HOM05D004912 ORTHO05D006144 7.4e-15 84.7 174 37.4
BcaC03g15331 Brassica carinata HOM05D004912 ORTHO05D006144 9.7e-15 84.3 148 39.2
C02p29360 Brassica napus HOM05D004912 ORTHO05D006144 9.7e-15 84.3 148 39.2
BolC2t08987H Brassica oleracea HOM05D004912 ORTHO05D006144 9.7e-15 84.3 148 39.2
Prupe.1G554000 Prunus persica HOM05D004912 ORTHO05D006144 1.7e-14 83.6 180 37.8
COL.COLO4_05030 Corchorus olitorius HOM05D004912 ORTHO05D006144 2.2e-14 83.2 200 34.5
Ciclev10001073m.g Citrus clementina HOM05D004912 ORTHO05D006144 2.8e-14 82.8 125 42.4
AT1G22600 Arabidopsis thaliana HOM05D004912 ORTHO05D006144 3.7e-14 82.4 182 37.4
Solyc11g022530.3 Solanum lycopersicum HOM05D004912 ORTHO05D006144 4.8e-14 82.0 143 39.2
AUR62004613 Chenopodium quinoa HOM05D004912 ORTHO05D006144 6.3e-14 81.6 175 35.4
Sopen11g011640 Solanum pennellii HOM05D004912 ORTHO05D006144 8.2e-14 81.3 143 38.5
AT1G72100 Arabidopsis thaliana HOM05D004912 ORTHO05D006144 1.8e-13 80.1 149 38.9
Carub.0001s2211 Capsella rubella HOM05D004912 ORTHO05D006144 1.8e-13 80.1 183 38.8
Gohir.D13G123600 Gossypium hirsutum HOM05D004912 ORTHO05D006144 3.1e-13 79.3 149 39.6
Gohir.A13G119900 Gossypium hirsutum HOM05D004912 ORTHO05D006144 4.1e-13 79.0 149 39.6
CARHR022970 Cardamine hirsuta HOM05D004912 ORTHO05D006144 6.9e-13 78.2 147 42.9
CDE08G1543 Ceratophyllum demersum HOM05D004912 ORTHO05D006144 9.1e-13 77.8 139 41.7
Sabra13G0093000 Salix brachista HOM05D004912 ORTHO05D006144 9.1e-13 77.8 147 38.1
SGA_v2.0_scaffold19G08943 Striga asiatica HOM05D004912 ORTHO05D006144 9.1e-13 77.8 162 37.7
CARHR064910 Cardamine hirsuta HOM05D004912 ORTHO05D006144 1.2e-12 77.4 147 38.8
ClCG08G000690 Citrullus lanatus HOM05D004912 ORTHO05D006144 2.6e-12 76.3 171 35.1
Atru.chr13.2352 Acer truncatum HOM05D004912 ORTHO05D006144 7.7e-12 74.7 141 35.5
Sed0022690 Sechium edule HOM05D004912 ORTHO05D006144 1.0e-11 74.3 174 37.4
unitig_748.g7733 Utricularia gibba HOM05D004912 ORTHO05D006144 1.0e-11 74.3 144 36.8
Phvul.011G001700 Phaseolus vulgaris HOM05D004912 ORTHO05D006144 1.3e-11 73.9 139 38.8
BcaB05g24704 Brassica carinata HOM05D004912 ORTHO05D006144 1.7e-11 73.6 137 37.2
CiPaw.08G002400 Carya illinoinensis HOM05D004912 ORTHO05D006144 1.7e-11 73.6 152 42.1
Sp1g20090 Schrenkiella parvula HOM05D004912 ORTHO05D006144 2.2e-11 73.2 175 38.3
CsaV3_5G040180 Cucumis sativus L. HOM05D004912 ORTHO05D006144 2.9e-11 72.8 159 33.3
TWI23G1256 Tripterygium wilfordii HOM05D004912 ORTHO05D006144 3.8e-11 72.4 142 40.1
ClCG11G008550 Citrullus lanatus HOM05D004912 ORTHO05D006144 1.1e-10 70.9 172 33.1
A07p14290 Brassica napus HOM05D004912 ORTHO05D006144 1.9e-10 70.1 172 34.9
BraA07t29186Z Brassica rapa HOM05D004912 ORTHO05D006144 1.9e-10 70.1 172 34.9
MELO3C022195.2 Cucumis melo HOM05D004912 ORTHO05D006144 4.2e-10 68.9 173 33.5
PGR102G1759 Punica granatum HOM05D004912 ORTHO05D006144 7.2e-10 68.2 148 37.8
BolC7t42633H Brassica oleracea HOM05D004912 ORTHO05D006144 9.4e-10 67.8 172 32.0
Gohir.A05G272850 Gossypium hirsutum HOM05D004912 ORTHO05D006144 9.4e-10 67.8 146 35.6
Lalb_Chr01g0000121 Lupinus albus HOM05D004912 ORTHO05D006144 9.4e-10 67.8 168 34.5
BcaB03g14195 Brassica carinata HOM05D004912 ORTHO05D006144 1.2e-09 67.4 156 36.5
BcaC06g34978 Brassica carinata HOM05D004912 ORTHO05D006144 1.2e-09 67.4 172 33.7
GSVIVG01001769001 Vitis vinifera HOM05D004912 ORTHO05D006144 1.2e-09 67.4 176 33.0
unitig_32.g11185 Utricularia gibba HOM05D004912 ORTHO05D006144 1.6e-09 67.0 144 31.2
C07p21010 Brassica napus HOM05D004912 ORTHO05D006144 2.1e-09 66.6 172 33.1
Hund27105 Selenicereus undatus HOM05D004912 ORTHO05D006144 2.1e-09 66.6 151 32.5
ATR1134G033 Amborella trichopoda HOM05D004912 ORTHO05D006144 3.6e-09 65.9 134 34.3
Gorai.013G138700 Gossypium raimondii HOM05D004912 ORTHO05D006144 2.3e-08 63.2 135 37.8
Hma1.2p1_0009F.1_g005990 Hydrangea macrophylla HOM05D004912 ORTHO05D006144 5.2e-08 62.0 128 35.9
Glyma.12G001600 Glycine max HOM05D004912 ORTHO05D006144 5.7e-07 58.5 174 32.2
Gohir.D05G275200 Gossypium hirsutum HOM05D004912 ORTHO05D006144 2.2e-06 56.6 185 29.2
Rhsim11G0053200 Rhododendron simsii HOM05D004912 ORTHO05D006144 2.2e-06 56.6 134 32.1
AL1G36130 Arabidopsis lyrata HOM05D004912 ORTHO05D006144 8.2e-06 54.7 147 30.6
HanXRQChr11g0326311 Helianthus annuus HOM05D004912 ORTHO05D006144 8.2e-06 54.7 145 35.2


User provided reference genes

Program Settings