Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 9.3e-53 209.9 104 100.0
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.2e-29 131.7 94 64.9
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 9.3e-29 130.2 89 68.5
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 2.7e-28 128.6 80 73.8
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 3.5e-28 128.3 84 72.6
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.5e-28 128.3 80 73.8
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 4.6e-28 127.9 85 67.1
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 7.9e-28 127.1 82 69.5
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 1.0e-27 126.7 91 63.7
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.3e-27 126.3 102 61.8
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 1.8e-27 125.9 79 73.4
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.8e-27 125.9 79 73.4
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.8e-27 125.9 117 57.3
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.3e-27 125.6 77 74.0
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 3.0e-27 125.2 96 64.6
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 3.0e-27 125.2 85 67.1
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 3.0e-27 125.2 89 66.3
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 5.1e-27 124.4 78 73.1
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 5.1e-27 124.4 83 69.9
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 5.1e-27 124.4 111 59.5
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 8.7e-27 123.6 78 74.4
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.1e-26 123.2 77 71.4
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.5e-26 122.9 79 73.4
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 1.5e-26 122.9 78 71.8
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.9e-26 122.5 106 59.4
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.9e-26 122.5 94 61.7
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 2.5e-26 122.1 77 74.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 2.5e-26 122.1 89 62.9
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 3.3e-26 121.7 106 58.5
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 3.3e-26 121.7 76 73.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 3.3e-26 121.7 81 72.8
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 3.3e-26 121.7 94 60.6
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 4.3e-26 121.3 78 70.5
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 5.7e-26 120.9 78 71.8
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 5.7e-26 120.9 101 61.4
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 5.7e-26 120.9 101 61.4
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 5.7e-26 120.9 101 61.4
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 9.6e-26 120.2 78 71.8
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 2.1e-25 119.0 78 69.2
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.7e-25 118.2 103 56.3
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 4.8e-25 117.9 101 59.4
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 8.2e-25 117.1 77 70.1
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 1.1e-24 116.7 81 66.7
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.4e-24 116.3 90 63.3
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.4e-24 115.5 94 58.5
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.4e-24 115.5 94 58.5
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 3.1e-24 115.2 63 79.4
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 9.0e-24 113.6 96 60.4
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 1.5e-23 112.8 83 63.9
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 5.8e-23 110.9 63 74.6
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.9e-21 105.9 117 51.3
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 3.2e-21 105.1 97 57.7
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 5.5e-21 104.4 74 67.6
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.2e-20 103.2 70 68.6
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 2.7e-20 102.1 79 62.0
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 3.5e-20 101.7 76 64.5
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 6.1e-20 100.9 76 67.1
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.3e-19 99.8 92 54.3
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 1.8e-19 99.4 70 67.1
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 3.0e-19 98.6 83 57.8
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 3.9e-19 98.2 122 48.4
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 8.7e-19 97.1 78 61.5
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 1.9e-18 95.9 79 59.5
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 2.5e-18 95.5 110 48.2
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 9.7e-18 93.6 61 70.5
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 1.3e-17 93.2 44 88.6
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 1.4e-16 89.7 45 84.4
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 1.8e-16 89.4 66 62.1
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 5.3e-16 87.8 94 52.1
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 2.6e-15 85.5 98 42.9
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 3.8e-14 81.6 99 49.5
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 3.8e-14 81.6 85 50.6
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.9e-13 79.3 99 46.5
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 1.9e-13 79.3 63 55.6
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.2e-12 76.6 94 46.8
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 6.1e-12 74.3 73 53.4
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 8.8e-11 70.5 72 50.0
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 1.7e-09 66.2 64 51.6
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 3.4e-07 58.5 30 76.7
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 4.5e-07 58.2 48 60.4
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.3e-06 56.6 48 58.3


User provided reference genes

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