Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 5.0e-41 170.6 84 100.0
SalBow7G2761 Salvia bowleyana HOM05D007628 ORTHO05D007342 1.0e-17 93.2 56 69.6
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 4.0e-14 81.3 78 51.3
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 5.2e-14 80.9 81 54.3
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 8.9e-14 80.1 78 48.7
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 1.2e-13 79.7 84 56.0
Cc10_g10240 Coffea canephora HOM05D007628 ORTHO05D007342 1.5e-13 79.3 77 54.5
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 2.6e-13 78.6 84 53.6
Prupe.1G552700 Prunus persica HOM05D007628 ORTHO05D007342 3.4e-13 78.2 74 55.4
SalBow7G0776 Salvia bowleyana HOM05D007628 ORTHO05D007342 4.4e-13 77.8 45 68.9
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 5.8e-13 77.4 78 44.9
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 9.9e-13 76.6 75 48.0
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 2.2e-12 75.5 76 47.4
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 3.8e-12 74.7 80 48.8
arahy.Tifrunner.gnm1.ann1.UI0JR9 Arachis hypogaea HOM05D007628 ORTHO05D007342 1.1e-11 73.2 82 47.6
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.1e-11 73.2 65 56.9
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 2.4e-11 72.0 55 61.8
Lj4g0016425 Lotus japonicus HOM05D007628 ORTHO05D007342 2.4e-11 72.0 78 48.7
arahy.Tifrunner.gnm1.ann1.I9AMSX Arachis hypogaea HOM05D007628 ORTHO05D007342 4.1e-11 71.2 82 47.6
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 4.1e-11 71.2 53 60.4
Lalb_Chr01g0016231 Lupinus albus HOM05D007628 ORTHO05D007342 4.1e-11 71.2 66 53.0
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 4.1e-11 71.2 84 47.6
RcHm_v2.0_Chr7g0228231 Rosa chinensis HOM05D007628 ORTHO05D007342 4.1e-11 71.2 55 61.8
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 5.4e-11 70.9 52 55.8
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 5.4e-11 70.9 77 48.1
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 5.4e-11 70.9 75 50.7
FvH4_5g32140 Fragaria vesca HOM05D007628 ORTHO05D007342 7.1e-11 70.5 55 60.0
FAN18G2608 Fragaria x ananassa HOM05D007628 ORTHO05D007342 7.1e-11 70.5 55 60.0
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 7.1e-11 70.5 74 47.3
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 9.2e-11 70.1 55 58.2
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 9.2e-11 70.1 73 47.9
Haze_21294 Corylus avellana HOM05D007628 ORTHO05D007342 1.2e-10 69.7 85 45.9
unitig_8.g5068 Utricularia gibba HOM05D007628 ORTHO05D007342 1.2e-10 69.7 82 45.1
FAN14G5279 Fragaria x ananassa HOM05D007628 ORTHO05D007342 2.1e-10 68.9 82 46.3
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 2.1e-10 68.9 63 54.0
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.1e-10 68.9 78 44.9
RcHm_v2.0_Chr7g0228331 Rosa chinensis HOM05D007628 ORTHO05D007342 2.7e-10 68.6 54 57.4
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.7e-10 68.6 78 46.2
Medtr4g032815 Medicago truncatula HOM05D007628 ORTHO05D007342 3.5e-10 68.2 82 47.6
QL02p025803 Quercus lobata HOM05D007628 ORTHO05D007342 3.5e-10 68.2 72 47.2
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 4.6e-10 67.8 64 50.0
Prupe.1G552600 Prunus persica HOM05D007628 ORTHO05D007342 4.6e-10 67.8 85 49.4
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 7.8e-10 67.0 78 43.6
unitig_8.g5066 Utricularia gibba HOM05D007628 ORTHO05D007342 7.8e-10 67.0 52 57.7
DCAR_001460 Daucus carota HOM05D001035 ORTHO05D001045 1.0e-09 66.6 55 58.2
Eucgr.F03003 Eucalyptus grandis HOM05D007628 ORTHO05D007342 1.0e-09 66.6 76 47.4
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 1.3e-09 66.2 79 43.0
SHI05836 Sapria himalayana HOM05D007628 ORTHO05D007342 1.3e-09 66.2 69 52.2
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.7e-09 65.9 76 44.7
AUR62004619 Chenopodium quinoa HOM05D007628 ORTHO05D007342 2.3e-09 65.5 83 45.8
Psat7g225880 Pisum sativum HOM05D007628 ORTHO05D007342 3.0e-09 65.1 71 46.5
RcHm_v2.0_Chr7g0228201 Rosa chinensis HOM05D007628 ORTHO05D007342 3.0e-09 65.1 76 48.7
TPR.G34100 Trifolium pratense HOM05D007628 ORTHO05D007342 3.0e-09 65.1 77 42.9
FvH4_6g07490 Fragaria vesca HOM05D007628 ORTHO05D007342 3.9e-09 64.7 83 45.8
PGR042G2312 Punica granatum HOM05D007628 ORTHO05D007342 3.9e-09 64.7 67 47.8
CSS0040221 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 5.1e-09 64.3 59 49.2
FvH4_5g32180 Fragaria vesca HOM05D007628 ORTHO05D007342 6.6e-09 63.9 82 45.1
Ah.06g183420 Amaranthus hybridus HOM05D007628 ORTHO05D007342 8.7e-09 63.5 67 44.8
FvH4_5g32170 Fragaria vesca HOM05D007628 ORTHO05D007342 8.7e-09 63.5 53 54.7
AUR62022642 Chenopodium quinoa HOM05D007628 ORTHO05D007342 1.1e-08 63.2 83 44.6
QL02p025972 Quercus lobata HOM05D007628 ORTHO05D007342 1.1e-08 63.2 44 65.9
QL93p0163_0041 Quercus lobata HOM05D007628 ORTHO05D007342 1.1e-08 63.2 44 65.9
Cfa012934 Carpinus fangiana HOM05D007628 ORTHO05D007342 1.9e-08 62.4 79 43.0
FAN08G0137 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.9e-08 62.4 81 42.0
FAN08G3446 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.9e-08 62.4 81 42.0
CSS0046525 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.3e-08 61.6 51 49.0
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 3.3e-08 61.6 77 42.9
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 3.3e-08 61.6 79 46.8
AT1G72060 Arabidopsis thaliana HOM05D007628 ORTHO05D007342 4.3e-08 61.2 50 56.0
Manes.18G104000 Manihot esculenta HOM05D007628 ORTHO05D007342 4.3e-08 61.2 47 57.4
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 4.3e-08 61.2 73 47.9
unitig_578.g16589 Utricularia gibba HOM05D007628 ORTHO05D007342 4.3e-08 61.2 85 41.2
CSS0048807 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 5.6e-08 60.8 72 43.1
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 5.6e-08 60.8 70 48.6
Sc16g0006710 Simmondsia chinensis HOM05D007628 ORTHO05D007342 5.6e-08 60.8 77 44.2
FAN08G2431 Fragaria x ananassa HOM05D007628 ORTHO05D007342 7.3e-08 60.5 84 46.4
Os03g0734300 Oryza sativa ssp. japonica HOM05D007628 ORTHO05D007342 7.3e-08 60.5 75 45.3
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 7.3e-08 60.5 81 42.0
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 7.3e-08 60.5 81 42.0
BcaC03g15330 Brassica carinata HOM05D007628 ORTHO05D007342 9.6e-08 60.1 53 54.7
C02p29350 Brassica napus HOM05D007628 ORTHO05D007342 9.6e-08 60.1 53 54.7
BolC2t08986H Brassica oleracea HOM05D007628 ORTHO05D007342 9.6e-08 60.1 53 54.7
Manes.18G103800 Manihot esculenta HOM05D007628 ORTHO05D007342 9.6e-08 60.1 69 46.4
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 9.6e-08 60.1 78 41.0
BcaB05g24703 Brassica carinata HOM05D007628 ORTHO05D007342 1.2e-07 59.7 80 42.5
BraA02t06812Z Brassica rapa HOM05D007628 ORTHO05D007342 1.2e-07 59.7 53 54.7
QL02p025976 Quercus lobata HOM05D007628 ORTHO05D007342 1.2e-07 59.7 67 49.3
QL93p0163_0044 Quercus lobata HOM05D007628 ORTHO05D007342 1.2e-07 59.7 67 49.3
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 1.6e-07 59.3 78 39.7
RcHm_v2.0_Chr7g0228301 Rosa chinensis HOM05D007628 ORTHO05D007342 1.6e-07 59.3 48 58.3
Actinidia25283 Actinidia chinensis HOM05D007628 ORTHO05D007342 2.1e-07 58.9 77 45.5
Ah.09g230940 Amaranthus hybridus HOM05D007628 ORTHO05D007342 2.1e-07 58.9 65 49.2
Carub.0002s1884 Capsella rubella HOM05D007628 ORTHO05D007342 2.8e-07 58.5 77 41.6
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 2.8e-07 58.5 51 58.8
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.8e-07 58.5 75 44.0
Zm00001eb127310 Zea mays HOM05D007628 ORTHO05D007342 2.8e-07 58.5 77 42.9
CSS0007364 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.6e-07 58.2 72 43.1
Aa31LG4G8570 Aethionema arabicum HOM05D007628 ORTHO05D007342 4.7e-07 57.8 68 45.6
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 4.7e-07 57.8 51 54.9
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.7e-07 57.8 51 56.9
EL10Ac1g00115 Beta vulgaris HOM05D007628 ORTHO05D007342 6.2e-07 57.4 76 44.7
Sabra19G0091700 Salix brachista HOM05D003906 ORTHO05D004776 6.2e-07 57.4 79 40.5
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 6.2e-07 57.4 51 58.8
TPR.G34171 Trifolium pratense HOM05D007628 ORTHO05D007342 6.2e-07 57.4 66 47.0
unitig_578.g16588 Utricularia gibba HOM05D007628 ORTHO05D007342 6.2e-07 57.4 53 49.1
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.1e-06 56.6 38 65.8
Hund27101 Selenicereus undatus HOM05D007628 ORTHO05D007342 1.4e-06 56.2 73 41.1
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.4e-06 56.2 38 65.8
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 1.4e-06 56.2 74 47.3
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-06 56.2 38 65.8
Potri.019G080600 Populus trichocarpa HOM05D007628 ORTHO05D007342 1.8e-06 55.8 70 41.4
CARHR064880 Cardamine hirsuta HOM05D007628 ORTHO05D007342 2.4e-06 55.5 77 36.4
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 3.1e-06 55.1 38 63.2
GSVIVG01023245001 Vitis vinifera HOM05D007628 ORTHO05D007342 4.0e-06 54.7 65 44.6
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.2e-06 54.3 51 54.9
CSS0008166 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 9.0e-06 53.5 45 51.1
Hund02181 Selenicereus undatus HOM05D007628 ORTHO05D007342 9.0e-06 53.5 76 36.8


User provided reference genes

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