Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 0.0e+00 1493.8 764 100.0
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 1.5e-296 1022.7 630 86.7
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 4.2e-251 871.7 781 63.0
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 5.5e-227 791.6 733 58.9
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 1.4e-203 713.8 736 55.2
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 1.9e-179 633.6 745 52.2
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 1.5e-176 624.0 742 49.3
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 1.1e-155 554.7 768 45.6
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 6.8e-153 545.4 784 44.1
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 3.2e-150 536.6 789 44.6
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 4.6e-149 532.7 785 44.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 3.6e-146 523.1 784 43.6
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 3.5e-141 506.5 737 45.0
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.3e-140 503.8 770 42.2
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.1e-138 497.3 782 43.4
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 1.4e-137 494.6 713 44.7
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 4.0e-137 493.0 719 43.7
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 1.3e-132 478.0 809 40.7
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 3.0e-132 476.9 802 42.3
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 3.9e-132 476.5 791 41.0
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 2.0e-128 464.2 668 45.8
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 1.7e-127 461.1 780 41.0
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.5e-123 448.0 761 41.1
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 6.4e-119 432.6 751 39.0
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 2.1e-117 427.6 752 38.6
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 4.6e-117 426.4 774 39.1
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 6.7e-116 422.5 714 40.8
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.5e-115 420.6 667 42.3
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 1.4e-113 414.8 796 37.7
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.0e-111 408.7 800 37.9
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.7e-111 407.9 770 38.6
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.2e-111 407.5 798 37.5
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 4.9e-111 406.4 744 38.6
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 4.9e-111 406.4 747 39.6
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 3.2e-110 403.7 761 37.8
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 9.7e-107 392.1 716 39.0
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 2.2e-106 391.0 510 46.5
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 2.4e-105 387.5 717 38.6
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 7.7e-104 382.5 759 36.0
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.0e-100 372.1 769 37.3
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 2.3e-100 370.9 767 37.7
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 7.4e-99 365.9 761 37.7
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.3e-98 365.2 760 37.5
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.2e-98 364.4 767 37.5
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 6.3e-98 362.8 763 35.6
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 9.1e-97 359.0 780 36.7
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 7.7e-96 355.9 784 36.6
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.1e-94 352.1 768 34.0
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 3.2e-94 350.5 776 36.0
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 5.5e-94 349.7 798 34.2
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 1.3e-90 338.6 664 37.3
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.1e-89 334.0 743 33.5
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 2.9e-87 327.4 699 35.5
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 4.2e-86 323.6 552 40.4
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 6.1e-85 319.7 749 33.4
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 3.9e-84 317.0 755 32.5
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.5e-83 315.1 812 33.1
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 7.7e-80 302.8 695 35.3
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 1.9e-78 298.1 701 34.7
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 3.2e-78 297.4 694 34.7
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 1.2e-77 295.4 843 30.8
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 1.0e-76 292.4 473 41.2
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 8.3e-74 282.7 788 31.0
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 1.4e-73 282.0 702 32.1
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 2.4e-73 281.2 677 34.3
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 7.0e-73 279.6 695 31.5
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 9.1e-73 279.3 787 31.3
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.7e-71 275.0 694 34.4
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 2.9e-71 274.2 695 31.9
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 5.0e-71 273.5 773 31.0
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 8.5e-71 272.7 698 33.1
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.9e-70 271.6 484 38.4
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 3.2e-70 270.8 741 32.5
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 7.2e-70 269.6 760 31.4
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 7.5e-67 259.6 709 33.3
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.3e-66 258.8 715 32.3
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.3e-66 258.8 769 31.3
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 1.4e-65 255.4 756 30.0
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.8e-65 255.0 756 29.9
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 4.1e-65 253.8 721 30.1
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 7.7e-64 249.6 555 35.3
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 4.2e-62 243.8 764 29.6
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 9.5e-62 242.7 746 30.6
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 4.0e-60 237.3 764 29.6
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 4.4e-59 233.8 757 31.3
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 2.2e-58 231.5 523 34.0
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 5.4e-57 226.9 537 34.1
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 5.4e-57 226.9 595 33.4
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 3.5e-56 224.2 558 34.9
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 1.3e-55 222.2 736 31.4
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 2.3e-55 221.5 540 34.1
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 8.0e-53 213.0 751 28.2
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 4.0e-52 210.7 753 28.7
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 1.3e-47 195.7 663 29.0
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.8e-44 185.3 742 27.9
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 2.9e-42 177.9 359 35.9
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.5e-38 165.6 552 28.4
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 9.5e-38 162.9 760 26.6
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 6.8e-28 130.2 740 24.7
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 3.4e-27 127.9 414 30.7
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 7.3e-22 110.2 138 48.6
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 1.3e-21 109.4 640 24.1
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 3.1e-20 104.8 269 34.6
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 8.4e-18 96.7 271 29.5
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 1.9e-17 95.5 84 57.1
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 4.0e-12 77.8 549 23.7
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 5.8e-11 73.9 130 40.0
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 2.2e-10 72.0 204 32.8
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 8.4e-10 70.1 150 33.3
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 1.9e-09 68.9 167 34.7


User provided reference genes

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