Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 3.8e-41 171.4 109 100.0
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 5.2e-22 107.8 89 84.3
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 8.9e-22 107.1 89 87.6
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 8.3e-20 100.5 89 73.0
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 2.7e-18 95.5 65 75.4
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.7e-17 92.8 49 87.8
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 3.6e-15 85.1 67 62.7
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 1.4e-14 83.2 51 76.5
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 3.0e-14 82.0 55 78.2
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 3.0e-14 82.0 55 78.2
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 3.0e-14 82.0 65 66.2
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 4.0e-14 81.6 50 78.0
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 4.0e-14 81.6 50 78.0
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 4.0e-14 81.6 69 58.0
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 5.2e-14 81.3 50 78.0
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 5.2e-14 81.3 55 78.2
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 5.2e-14 81.3 55 78.2
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 6.8e-14 80.9 49 75.5
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 6.8e-14 80.9 52 75.0
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 8.9e-14 80.5 50 80.0
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-13 79.7 49 77.6
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.5e-13 79.7 49 77.6
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 1.5e-13 79.7 49 77.6
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 1.5e-13 79.7 62 69.4
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 2.0e-13 79.3 51 76.5
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 2.6e-13 79.0 48 77.1
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 2.6e-13 79.0 58 69.0
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 3.4e-13 78.6 62 67.7
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 3.4e-13 78.6 47 80.9
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 4.4e-13 78.2 49 75.5
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 4.4e-13 78.2 63 63.5
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 5.8e-13 77.8 48 77.1
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 5.8e-13 77.8 48 77.1
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 5.8e-13 77.8 52 73.1
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 7.5e-13 77.4 45 80.0
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 7.5e-13 77.4 48 75.0
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 7.5e-13 77.4 41 82.9
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 9.8e-13 77.0 46 76.1
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 1.3e-12 76.6 45 77.8
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.3e-12 76.6 60 66.7
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 2.2e-12 75.9 47 76.6
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 2.2e-12 75.9 65 63.1
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 2.9e-12 75.5 47 76.6
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 2.9e-12 75.5 43 83.7
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 3.7e-12 75.1 56 67.9
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 3.7e-12 75.1 56 67.9
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 3.7e-12 75.1 46 73.9
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 3.7e-12 75.1 58 69.0
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 4.9e-12 74.7 44 84.1
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 6.4e-12 74.3 59 66.1
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 8.3e-12 73.9 44 77.3
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 8.3e-12 73.9 44 77.3
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 8.3e-12 73.9 44 77.3
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 8.3e-12 73.9 44 77.3
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 8.3e-12 73.9 42 78.6
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 8.3e-12 73.9 47 74.5
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 8.3e-12 73.9 58 69.0
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 8.3e-12 73.9 64 62.5
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 1.1e-11 73.6 42 81.0
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.4e-11 73.2 45 73.3
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 1.4e-11 73.2 45 73.3
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.9e-11 72.8 49 69.4
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 1.9e-11 72.8 45 71.1
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 1.9e-11 72.8 45 71.1
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 1.9e-11 72.8 52 73.1
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 2.4e-11 72.4 54 68.5
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 2.4e-11 72.4 60 66.7
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 3.2e-11 72.0 36 88.9
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 4.1e-11 71.6 37 86.5
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 4.1e-11 71.6 46 71.7
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 4.1e-11 71.6 48 75.0
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 5.4e-11 71.2 42 76.2
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 5.4e-11 71.2 42 71.4
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 7.0e-11 70.9 58 67.2
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 7.0e-11 70.9 49 73.5
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 9.2e-11 70.5 51 70.6
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 2.0e-10 69.3 43 79.1
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 2.0e-10 69.3 43 79.1
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.0e-10 69.3 52 67.3
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 2.7e-10 68.9 58 63.8
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 2.7e-10 68.9 38 81.6
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 3.5e-10 68.6 35 85.7
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 3.5e-10 68.6 42 73.8
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 3.5e-10 68.6 34 88.2
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 4.6e-10 68.2 64 57.8
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 6.0e-10 67.8 45 73.3
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 6.0e-10 67.8 67 58.2
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.3e-09 66.6 36 77.8
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.7e-09 66.2 39 76.9
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 5.0e-09 64.7 34 85.3
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 1.5e-08 63.2 67 55.2
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 1.9e-08 62.8 53 58.5
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 7.3e-08 60.8 54 59.3
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 3.6e-07 58.5 41 68.3
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 3.6e-07 58.5 52 61.5
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 4.7e-07 58.2 40 67.5
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 4.7e-07 58.2 51 58.8
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 8.9e-06 53.9 62 51.6


User provided reference genes

Program Settings