Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.0e-155 552.4 275 100.0
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 5.2e-87 325.1 284 60.6
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 4.6e-83 312.0 239 66.5
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 6.6e-82 308.1 208 72.1
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 1.9e-81 306.6 309 55.0
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.9e-77 292.0 235 63.4
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.4e-76 290.4 238 62.2
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 2.4e-76 289.7 236 60.6
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 2.4e-76 289.7 249 59.8
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 4.1e-76 288.9 206 69.4
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 7.1e-76 288.1 239 61.9
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.1e-75 286.6 190 74.2
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 1.0e-74 284.3 245 60.8
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.1e-73 280.8 211 62.6
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 1.5e-73 280.4 230 62.6
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.9e-73 280.0 237 59.9
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 2.5e-73 279.6 185 69.2
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 4.3e-73 278.9 209 64.1
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 9.6e-73 277.7 276 54.3
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 3.6e-72 275.8 224 62.5
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 6.2e-72 275.0 232 59.5
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 1.1e-71 274.2 188 68.6
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 1.1e-71 274.2 235 60.4
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 1.4e-71 273.9 196 68.4
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.4e-71 273.9 185 67.6
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.4e-71 273.9 271 54.6
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.4e-71 273.9 224 61.2
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.8e-71 273.5 206 65.5
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 1.8e-71 273.5 250 59.2
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 2.4e-71 273.1 298 49.0
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 4.0e-71 272.3 231 60.2
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.9e-71 271.2 224 61.6
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 2.0e-70 270.0 187 66.8
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.8e-70 268.5 234 60.3
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 5.8e-70 268.5 202 67.3
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 5.8e-70 268.5 226 61.9
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.3e-69 267.3 203 66.0
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.7e-69 266.9 206 63.6
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 2.2e-69 266.5 227 63.9
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 3.8e-69 265.8 196 65.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.4e-69 265.0 219 61.6
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-68 264.2 199 66.3
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-68 263.8 203 65.5
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 1.4e-68 263.8 188 69.7
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-68 263.1 203 65.5
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-68 263.1 277 54.2
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 3.2e-68 262.7 203 64.5
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 4.2e-68 262.3 185 68.6
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 5.4e-68 261.9 258 55.8
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 5.4e-68 261.9 250 56.4
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 5.4e-68 261.9 255 56.1
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 9.3e-68 261.2 228 59.2
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 1.6e-67 260.4 231 61.0
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 1.3e-66 257.3 251 53.8
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 2.3e-66 256.5 228 57.9
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 5.1e-66 255.4 205 63.4
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 5.1e-66 255.4 249 53.8
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 6.6e-66 255.0 211 59.7
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 8.7e-66 254.6 238 55.5
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.9e-65 253.4 256 54.7
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 2.5e-65 253.1 211 58.3
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 5.6e-65 251.9 197 66.0
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 5.6e-65 251.9 211 56.9
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 2.1e-64 250.0 283 49.8
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 2.8e-64 249.6 227 55.1
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.1e-64 248.1 236 56.4
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.4e-63 247.3 196 64.3
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 3.1e-63 246.1 154 72.1
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 3.4e-62 242.7 211 58.3
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 4.4e-62 242.3 228 53.9
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 7.6e-62 241.5 228 53.5
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 7.6e-62 241.5 228 53.9
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 1.3e-61 240.7 240 52.5
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.3e-61 240.7 252 50.4
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.3e-61 240.7 183 64.5
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.7e-61 240.4 211 58.3
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.7e-61 240.4 211 58.3
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 8.4e-61 238.0 200 59.0
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 1.1e-60 237.7 227 53.3
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.9e-60 236.9 212 58.5
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 5.4e-60 235.3 194 60.8
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 4.6e-59 232.3 212 57.1
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.3e-58 230.7 226 54.0
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 1.7e-58 230.3 228 52.6
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.7e-58 230.3 243 52.3
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.0e-58 229.6 210 55.7
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 9.6e-57 224.6 202 58.4
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 1.6e-56 223.8 228 53.5
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.6e-56 223.8 183 57.9
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.6e-56 222.6 184 59.8
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.6e-56 222.6 188 59.0
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 4.8e-56 222.2 186 58.6
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.1e-55 221.1 184 60.9
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 4.0e-55 219.2 184 58.7
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.3e-55 218.8 230 52.2
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 7.6e-54 214.9 185 61.1
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 6.0e-51 205.3 147 67.3
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.8e-50 203.8 146 65.1
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 3.7e-48 196.1 189 52.4
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 8.1e-48 194.9 197 49.7
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 2.1e-40 170.2 171 52.0
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 6.3e-40 168.7 112 70.5
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 6.5e-37 158.7 161 55.3
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 9.3e-36 154.8 132 63.6
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 6.7e-34 148.7 120 64.2
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 1.1e-33 147.9 169 47.9
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.1e-33 147.9 150 55.3
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 2.5e-33 146.7 131 61.8
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.5e-33 146.7 131 55.7
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.3e-32 142.1 116 62.9
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.7e-29 134.0 183 39.9
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 4.6e-27 125.9 116 57.8
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.5e-25 120.2 112 56.2
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 4.3e-25 119.4 114 55.3
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.3e-24 117.9 119 55.5
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.4e-23 114.4 126 50.0
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.1e-19 100.5 95 56.8
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 3.0e-18 96.7 113 40.7
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 5.1e-18 95.9 200 34.5
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 7.4e-17 92.0 149 42.3
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 7.4e-17 92.0 74 62.2
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 8.8e-10 68.6 46 65.2
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.2e-08 62.0 64 54.7
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.4e-07 60.5 66 50.0
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 7.0e-07 58.9 112 33.0
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 9.1e-07 58.5 83 33.7
Cre16.g657150 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 1.6e-06 57.8 107 34.6
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 3.5e-06 56.6 192 25.5
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 5.9e-06 55.8 78 29.5


User provided reference genes

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