Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 1.1e-53 213.0 107 100.0
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 6.9e-35 150.6 107 72.0
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 2.2e-33 145.6 107 72.0
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.1e-32 143.3 107 71.0
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 1.4e-32 142.9 105 71.4
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 2.4e-32 142.1 107 70.1
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 7.1e-32 140.6 107 71.0
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 2.1e-31 139.0 107 68.2
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 2.1e-31 139.0 107 69.2
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 4.6e-31 137.9 106 66.0
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 6.0e-31 137.5 106 67.0
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 1.3e-30 136.3 90 75.6
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.3e-30 136.3 90 75.6
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.7e-30 136.0 106 67.0
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 2.3e-30 135.6 107 64.5
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 3.0e-30 135.2 90 75.6
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 3.9e-30 134.8 106 66.0
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.9e-30 134.8 106 66.0
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.9e-30 134.8 90 74.4
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 3.9e-30 134.8 107 64.5
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 6.6e-30 134.0 107 66.4
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 6.6e-30 134.0 90 74.4
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 6.6e-30 134.0 107 66.4
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 6.6e-30 134.0 107 68.2
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 8.7e-30 133.7 98 69.4
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 8.7e-30 133.7 105 65.7
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 8.7e-30 133.7 104 65.4
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 8.7e-30 133.7 104 65.4
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 8.7e-30 133.7 104 65.4
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.5e-29 132.1 105 67.6
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 2.5e-29 132.1 105 65.7
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 3.3e-29 131.7 107 66.4
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 3.3e-29 131.7 106 65.1
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 4.3e-29 131.3 105 61.9
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 5.6e-29 131.0 98 68.4
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 5.6e-29 131.0 105 66.7
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 7.3e-29 130.6 103 63.1
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 7.3e-29 130.6 107 61.7
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 1.3e-28 129.8 91 70.3
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 1.3e-28 129.8 106 63.2
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 1.6e-28 129.4 107 65.4
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 2.8e-28 128.6 103 63.1
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 2.8e-28 128.6 98 70.4
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 3.6e-28 128.3 103 64.1
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 3.6e-28 128.3 103 64.1
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 4.8e-28 127.9 90 71.1
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 4.8e-28 127.9 109 64.2
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 4.8e-28 127.9 107 63.6
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 6.2e-28 127.5 97 67.0
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 6.2e-28 127.5 102 61.8
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 8.1e-28 127.1 125 56.8
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 8.1e-28 127.1 103 63.1
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 1.1e-27 126.7 89 71.9
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 1.1e-27 126.7 108 64.8
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 1.1e-27 126.7 107 62.6
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 1.4e-27 126.3 107 63.6
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 1.4e-27 126.3 89 73.0
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 1.8e-27 125.9 103 62.1
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 2.4e-27 125.6 107 64.5
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 2.4e-27 125.6 98 67.3
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 4.0e-27 124.8 106 62.3
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 4.0e-27 124.8 107 61.7
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 4.0e-27 124.8 95 67.4
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 4.0e-27 124.8 107 64.5
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 5.3e-27 124.4 97 64.9
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 6.9e-27 124.0 90 68.9
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 6.9e-27 124.0 97 67.0
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 1.2e-26 123.2 103 61.2
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 1.5e-26 122.9 107 60.7
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 2.0e-26 122.5 107 61.7
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 2.6e-26 122.1 107 61.7
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 3.4e-26 121.7 107 60.7
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 3.4e-26 121.7 97 63.9
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 3.4e-26 121.7 97 63.9
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 5.8e-26 120.9 107 58.9
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 7.6e-26 120.6 93 68.8
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 7.6e-26 120.6 101 64.4
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 9.9e-26 120.2 107 58.9
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 9.9e-26 120.2 107 58.9
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 1.3e-25 119.8 93 65.6
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 1.3e-25 119.8 93 67.7
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 1.7e-25 119.4 87 69.0
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 1.7e-25 119.4 89 69.7
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.2e-25 119.0 92 65.2
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 2.9e-25 118.6 87 67.8
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 2.9e-25 118.6 96 66.7
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 4.9e-25 117.9 99 62.6
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 6.4e-25 117.5 89 65.2
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 6.4e-25 117.5 107 59.8
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 1.4e-24 116.3 89 66.3
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 1.4e-24 116.3 94 60.6
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 1.9e-24 115.9 103 60.2
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 3.2e-24 115.2 107 55.1
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 3.2e-24 115.2 84 69.0
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 4.2e-24 114.8 96 62.5
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 4.2e-24 114.8 102 56.9
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 5.4e-24 114.4 128 53.9
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 1.2e-23 113.2 101 60.4
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 1.6e-23 112.8 89 62.9
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 1.6e-23 112.8 89 62.9
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 1.6e-23 112.8 89 62.9
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 2.1e-23 112.5 101 60.4
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 2.7e-23 112.1 94 64.9
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 2.7e-23 112.1 89 61.8
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 2.7e-23 112.1 89 61.8
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 3.5e-23 111.7 96 61.5
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 4.6e-23 111.3 89 64.0
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 4.6e-23 111.3 89 64.0
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 4.6e-23 111.3 96 61.5
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 4.6e-23 111.3 108 56.5
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 1.0e-22 110.2 89 62.9
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 1.3e-22 109.8 94 61.7
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 3.0e-22 108.6 89 61.8
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 3.0e-22 108.6 89 59.6
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 3.9e-22 108.2 89 60.7
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 1.1e-21 106.7 77 66.2
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 3.3e-21 105.1 94 59.6
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 4.3e-21 104.8 84 63.1
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 4.3e-21 104.8 89 60.7
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 4.3e-21 104.8 89 60.7
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 4.3e-21 104.8 92 59.8
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 4.3e-21 104.8 94 56.4
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 9.6e-21 103.6 87 62.1
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 4.8e-20 101.3 107 52.3
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 8.1e-20 100.5 91 56.0
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 1.4e-19 99.8 107 52.3
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 5.3e-19 97.8 92 56.5
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 5.3e-19 97.8 108 50.9
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 2.6e-18 95.5 108 50.9
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 2.2e-17 92.4 75 65.3
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 4.9e-17 91.3 73 61.6
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 8.4e-17 90.5 75 64.0
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 1.4e-16 89.7 57 75.4
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 1.4e-16 89.7 74 63.5
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 2.7e-15 85.5 61 70.5
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 3.0e-14 82.0 82 53.7
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 3.0e-14 82.0 85 50.6
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 6.7e-14 80.9 83 51.8
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 8.7e-14 80.5 76 60.5
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 5.6e-13 77.8 54 70.4
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 1.6e-12 76.3 64 59.4
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 3.7e-12 75.1 60 63.3
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 1.8e-11 72.8 72 59.7
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 2.9e-09 65.5 83 48.2
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 3.8e-09 65.1 70 52.9
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 9.3e-08 60.5 69 47.8


User provided reference genes

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