Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 1.6e-180 636.0 321 100.0
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 5.5e-112 408.3 345 62.9
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 2.0e-106 389.8 333 60.7
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 5.9e-106 388.3 333 60.1
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 8.5e-105 384.4 336 59.5
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.6e-103 380.2 326 60.4
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 3.0e-102 375.9 334 58.4
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 4.8e-100 368.6 315 60.3
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 3.4e-98 362.5 313 55.6
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 4.2e-96 355.5 282 67.4
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 1.1e-93 347.4 327 56.0
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 1.1e-93 347.4 324 56.2
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 7.4e-93 344.7 341 54.8
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 9.7e-93 344.4 323 54.5
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 3.1e-91 339.3 324 53.4
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 4.1e-91 339.0 334 53.9
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 5.3e-91 338.6 333 54.7
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 3.5e-90 335.9 315 57.1
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 1.7e-89 333.6 330 55.5
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 1.7e-89 333.6 332 53.0
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 5.0e-89 332.0 331 54.4
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 4.2e-88 328.9 328 53.0
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 3.0e-86 322.8 322 51.6
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 8.8e-86 321.2 314 52.2
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 8.8e-86 321.2 324 51.9
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 7.4e-85 318.2 317 53.3
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 1.3e-84 317.4 378 46.3
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 1.7e-84 317.0 309 53.4
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 1.7e-84 317.0 310 53.9
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 2.8e-84 316.2 356 49.7
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 4.1e-83 312.4 319 51.7
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 9.1e-83 311.2 320 52.5
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 2.0e-82 310.1 320 50.0
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 1.0e-81 307.8 336 47.0
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 1.0e-81 307.8 321 52.0
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 2.9e-81 306.2 312 52.9
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 3.8e-81 305.8 317 48.6
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 6.5e-81 305.1 298 56.0
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 2.5e-80 303.1 324 49.7
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 5.5e-80 302.0 318 50.6
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 7.2e-80 301.6 318 50.6
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 2.7e-79 299.7 312 53.2
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 2.7e-79 299.7 318 50.3
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 2.7e-79 299.7 323 48.3
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 2.7e-79 299.7 312 51.0
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 3.6e-79 299.3 313 51.1
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 4.7e-79 298.9 315 51.1
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 3.0e-78 296.2 337 46.6
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 5.2e-78 295.4 289 55.7
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 1.5e-77 293.9 311 48.6
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 1.5e-77 293.9 321 50.5
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 2.0e-77 293.5 324 48.8
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 4.4e-77 292.4 330 48.5
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 1.3e-76 290.8 318 49.1
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 2.8e-76 289.7 331 46.2
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 4.8e-76 288.9 279 54.5
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 1.1e-75 287.7 326 48.8
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 1.1e-75 287.7 328 48.2
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 1.4e-75 287.3 324 51.2
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 4.1e-75 285.8 328 44.5
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 4.1e-75 285.8 323 47.4
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 5.3e-75 285.4 286 53.5
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 5.3e-75 285.4 333 45.6
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 5.9e-74 282.0 330 48.2
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 1.3e-73 280.8 339 45.1
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 1.5e-72 277.3 336 44.9
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 5.5e-72 275.4 275 53.5
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 2.7e-71 273.1 254 55.9
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 3.6e-71 272.7 338 44.4
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 6.1e-71 271.9 319 47.0
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 6.8e-70 268.5 396 40.7
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 1.4e-67 260.8 321 48.6
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.3e-65 254.2 275 52.7
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 3.3e-64 249.6 334 42.2
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 5.7e-61 238.8 229 54.1
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 2.9e-57 226.5 317 40.1
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 5.6e-56 222.2 208 54.8
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 6.8e-54 215.3 317 42.0
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 8.6e-49 198.4 218 49.1
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 1.5e-48 197.6 337 35.6
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.5e-45 187.6 194 53.6
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 1.6e-42 177.6 292 36.0
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 1.1e-40 171.4 332 34.3
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 6.2e-39 165.6 110 70.0
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 6.8e-38 162.2 110 68.2
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 2.6e-37 160.2 116 67.2
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.0e-33 148.3 116 62.9
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 7.3e-32 142.1 153 49.7
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 2.4e-30 137.1 103 64.1
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 3.4e-29 133.3 331 32.0
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 9.9e-29 131.7 104 57.7
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 7.1e-27 125.6 99 59.6
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 2.3e-17 94.0 150 36.7
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 3.4e-13 80.1 74 59.5
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 8.4e-12 75.5 56 71.4
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 6.0e-10 69.3 101 35.6
PRCOL_00006630 Prasinoderma coloniale HOM05D007524 ORTHO05D009475 1.4e-06 58.2 238 23.5


User provided reference genes

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