Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 4.5e-74 281.2 144 100.0
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 3.8e-28 128.6 221 43.9
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 2.5e-24 115.9 220 40.9
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 4.3e-24 115.2 220 40.0
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 3.6e-23 112.1 220 39.1
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.1e-22 110.5 220 39.5
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 1.8e-22 109.8 219 40.6
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.4e-22 109.4 217 41.0
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.2e-21 107.1 220 38.2
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 1.5e-21 106.7 220 38.2
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.5e-21 106.7 220 37.7
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.5e-21 106.7 220 37.7
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 2.6e-21 105.9 220 37.7
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 4.4e-21 105.1 220 37.7
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 9.9e-21 104.0 220 38.2
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.7e-20 103.2 220 37.3
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 2.2e-20 102.8 220 37.3
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.8e-20 102.1 217 38.7
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 4.9e-20 101.7 220 38.6
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 8.4e-20 100.9 220 37.3
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 8.4e-20 100.9 222 35.6
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 8.4e-20 100.9 220 37.7
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.4e-19 100.1 220 37.3
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.9e-19 99.8 220 37.3
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.2e-19 99.0 220 36.8
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 3.2e-19 99.0 220 36.8
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.2e-18 97.1 220 36.4
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.6e-18 96.7 220 35.9
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 1.6e-18 96.7 220 36.8
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 2.1e-18 96.3 82 64.6
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 2.7e-18 95.9 220 35.5
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 3.5e-18 95.5 81 65.4
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 3.5e-18 95.5 219 35.6
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 3.5e-18 95.5 220 38.2
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 4.6e-18 95.1 82 65.9
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.3e-17 93.6 220 35.9
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 1.3e-17 93.6 82 63.4
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 1.7e-17 93.2 220 34.1
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 2.3e-17 92.8 220 32.7
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 2.3e-17 92.8 82 63.4
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 3.0e-17 92.4 81 63.0
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.0e-17 92.4 220 35.0
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 3.9e-17 92.0 82 62.2
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 5.1e-17 91.7 82 62.2
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 5.1e-17 91.7 84 59.5
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 5.1e-17 91.7 82 64.6
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 6.6e-17 91.3 195 39.0
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 6.6e-17 91.3 82 63.4
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.5e-16 90.1 220 33.6
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.9e-16 89.7 82 61.0
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 1.9e-16 89.7 82 61.0
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 1.9e-16 89.7 221 35.3
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.9e-16 89.7 221 35.3
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.9e-16 89.7 221 35.3
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.9e-16 89.7 82 61.0
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 2.5e-16 89.4 82 59.8
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.3e-16 89.0 221 34.8
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 3.3e-16 89.0 221 34.8
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 3.3e-16 89.0 82 61.0
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 4.3e-16 88.6 219 34.2
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 4.3e-16 88.6 82 58.5
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 5.6e-16 88.2 82 58.5
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 5.6e-16 88.2 82 58.5
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 9.6e-16 87.4 82 59.8
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 1.3e-15 87.0 82 61.0
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.6e-15 86.7 82 59.8
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.6e-15 86.7 82 58.5
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 1.6e-15 86.7 82 61.0
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 1.6e-15 86.7 82 58.5
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.6e-15 86.7 82 59.8
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.1e-15 86.3 82 58.5
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 4.8e-15 85.1 81 55.6
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 6.2e-15 84.7 82 59.8
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 6.2e-15 84.7 82 57.3
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 8.1e-15 84.3 82 57.3
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.1e-14 84.0 152 39.5
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.4e-14 83.6 82 58.5
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 1.4e-14 83.6 220 32.7
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 2.4e-14 82.8 82 58.5
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 2.4e-14 82.8 82 58.5
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.4e-14 82.8 82 53.7
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 2.4e-14 82.8 221 34.4
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 4.0e-14 82.0 82 54.9
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 4.0e-14 82.0 82 54.9
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 4.0e-14 82.0 220 32.3
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 6.9e-14 81.3 82 56.1
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 6.9e-14 81.3 82 53.7
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.2e-13 80.5 82 54.9
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-13 80.1 82 54.9
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-13 80.1 82 54.9
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.5e-13 80.1 82 54.9
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 2.6e-13 79.3 220 31.4
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 7.6e-13 77.8 82 50.0
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 9.9e-13 77.4 82 53.7
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 1.3e-12 77.0 81 53.1
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 1.7e-12 76.6 82 52.4
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 1.7e-12 76.6 92 50.0
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 2.2e-12 76.3 82 52.4
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.9e-12 75.1 52 71.2
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.1e-11 71.2 71 52.1
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 4.6e-10 68.6 213 31.9
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 7.9e-10 67.8 219 28.8
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 2.3e-09 66.2 211 32.7
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 3.0e-09 65.9 216 30.6
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 6.7e-09 64.7 213 29.6
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.1e-08 63.9 219 30.1
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.1e-08 63.9 216 29.6
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 2.5e-08 62.8 216 30.1
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.5e-08 62.8 84 45.2
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.5e-08 62.8 84 45.2
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 3.3e-08 62.4 82 46.3
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 4.3e-08 62.0 81 42.0
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.6e-08 61.6 74 47.3
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 5.6e-08 61.6 216 30.1
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 9.6e-08 60.8 213 28.2
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 9.6e-08 60.8 213 28.2
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 9.6e-08 60.8 213 28.2
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 1.3e-07 60.5 213 28.2
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.8e-07 58.5 74 44.6
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 4.0e-06 55.5 56 55.4
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 5.3e-06 55.1 74 43.2


User provided reference genes

Program Settings