Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 1.1e-56 223.0 107 100.0
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.3e-41 172.9 107 79.4
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 1.5e-37 159.5 108 71.3
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.2e-36 156.4 102 73.5
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 2.1e-36 155.6 100 75.0
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 2.1e-36 155.6 102 73.5
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 6.2e-36 154.1 100 74.0
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 8.1e-36 153.7 100 70.0
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 2.4e-35 152.1 101 67.3
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 4.0e-35 151.4 100 70.0
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 4.0e-35 151.4 101 69.3
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 4.0e-35 151.4 101 69.3
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 5.2e-35 151.0 101 71.3
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 6.9e-35 150.6 99 67.7
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.5e-34 149.4 102 69.6
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.5e-34 149.4 103 68.9
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 3.4e-34 148.3 101 69.3
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 3.4e-34 148.3 104 69.2
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 3.4e-34 148.3 101 67.3
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 4.4e-34 147.9 100 70.0
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 5.8e-34 147.5 104 61.5
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 7.6e-34 147.1 99 69.7
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 7.6e-34 147.1 101 70.3
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 7.6e-34 147.1 101 67.3
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 9.9e-34 146.7 101 67.3
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.3e-33 146.4 97 69.1
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 1.3e-33 146.4 100 69.0
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.7e-33 146.0 98 68.4
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 1.7e-33 146.0 95 71.6
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.2e-33 145.6 99 66.7
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 2.2e-33 145.6 101 64.4
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.9e-33 145.2 101 68.3
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 2.9e-33 145.2 101 65.3
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.9e-33 144.4 96 70.8
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 6.4e-33 144.1 101 67.3
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 6.4e-33 144.1 107 65.4
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 8.4e-33 143.7 101 62.4
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 8.4e-33 143.7 98 66.3
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.4e-32 142.9 99 67.7
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 1.4e-32 142.9 101 65.3
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.4e-32 142.9 98 68.4
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 1.4e-32 142.9 101 65.3
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.9e-32 142.5 101 66.3
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.4e-32 142.1 98 65.3
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.4e-32 142.1 101 66.3
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 4.2e-32 141.4 113 62.8
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 4.2e-32 141.4 107 62.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 4.2e-32 141.4 101 66.3
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 4.2e-32 141.4 103 66.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 5.4e-32 141.0 101 63.4
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 7.1e-32 140.6 104 63.5
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 9.3e-32 140.2 98 64.3
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 9.3e-32 140.2 92 68.5
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.2e-31 139.8 90 72.2
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.2e-31 139.8 90 72.2
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.2e-31 139.8 90 72.2
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.6e-31 139.4 101 62.4
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.6e-31 139.4 92 70.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 2.7e-31 138.7 98 63.3
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 3.5e-31 138.3 102 60.8
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 4.6e-31 137.9 101 63.4
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 4.6e-31 137.9 113 60.2
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 4.6e-31 137.9 101 66.3
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 6.0e-31 137.5 104 61.5
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 6.0e-31 137.5 104 61.5
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 6.0e-31 137.5 93 66.7
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 1.0e-30 136.7 94 66.0
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.0e-30 136.7 90 68.9
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 3.0e-30 135.2 101 63.4
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 3.0e-30 135.2 101 63.4
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 3.9e-30 134.8 101 62.4
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 3.9e-30 134.8 91 67.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 3.9e-30 134.8 101 66.3
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 5.1e-30 134.4 101 62.4
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 5.1e-30 134.4 101 62.4
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 6.6e-30 134.0 101 60.4
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 2.5e-29 132.1 101 60.4
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.6e-29 131.0 100 61.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 7.3e-29 130.6 101 60.4
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 7.3e-29 130.6 101 57.4
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 7.3e-29 130.6 102 61.8
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.3e-28 129.8 93 62.4
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.3e-28 129.8 100 59.0
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.6e-28 129.4 102 58.8
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.6e-28 129.4 94 66.0
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.6e-28 129.4 99 63.6
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.6e-28 129.4 102 58.8
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 2.8e-28 128.6 101 58.4
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 2.8e-28 128.6 101 58.4
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 3.6e-28 128.3 101 59.4
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 4.8e-28 127.9 101 57.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 2.4e-27 125.6 101 58.4
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 2.4e-27 125.6 101 58.4
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 2.4e-27 125.6 99 64.6
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 9.0e-27 123.6 101 58.4
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 5.8e-26 120.9 101 55.4
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.8e-26 120.9 133 47.4
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 6.4e-25 117.5 79 69.6
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.2e-24 114.8 69 78.3
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.1e-23 112.5 66 74.2
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 2.3e-22 109.0 79 65.8
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 3.0e-22 108.6 79 67.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 5.1e-22 107.8 75 68.0
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 6.7e-22 107.5 92 47.8
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 6.7e-22 107.5 79 68.4
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 3.3e-21 105.1 107 49.5
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 4.8e-20 101.3 99 48.5
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 1.1e-19 100.1 84 63.1
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 9.0e-19 97.1 114 41.2
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 1.3e-17 93.2 66 71.2
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 6.4e-17 90.9 91 48.4
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 1.4e-16 89.7 67 68.7
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 2.4e-16 89.0 82 51.2
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 3.2e-16 88.6 68 67.6
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 4.3e-13 78.2 151 32.5
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.5e-10 69.7 92 42.4
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 1.7e-09 66.2 61 52.5
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.1e-08 63.5 52 61.5


User provided reference genes

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