Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.1e-116 423.3 218 100.0
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.6e-110 402.9 220 95.9
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 6.4e-64 248.1 225 60.9
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 2.4e-63 246.1 225 60.0
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 3.0e-61 239.2 224 57.6
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 2.4e-55 219.5 226 58.0
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 4.2e-55 218.8 209 58.9
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 3.2e-47 192.6 223 52.0
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 4.6e-46 188.7 228 52.6
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 2.3e-45 186.4 277 45.1
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.3e-43 180.6 220 53.2
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.6e-43 180.3 233 45.9
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 4.8e-43 178.7 214 49.1
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 8.2e-43 177.9 219 49.8
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.4e-42 177.2 220 49.1
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.4e-42 177.2 220 50.0
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.8e-42 176.8 227 49.8
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 2.4e-42 176.4 206 52.4
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 4.1e-42 175.6 233 47.2
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 4.1e-42 175.6 220 49.1
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 6.9e-42 174.9 173 53.2
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.2e-41 174.1 213 49.3
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 1.3e-40 170.6 239 48.1
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 2.9e-40 169.5 226 46.5
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 6.5e-40 168.3 232 46.6
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 1.4e-39 167.2 216 47.2
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.4e-39 167.2 216 47.2
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.4e-39 167.2 221 48.4
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 4.2e-39 165.6 231 46.3
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.2e-38 164.1 216 46.3
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 6.1e-38 161.8 224 46.0
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 7.9e-38 161.4 223 46.2
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.9e-38 161.4 241 43.6
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 7.9e-38 161.4 242 45.0
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 1.0e-37 161.0 211 47.9
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 3.0e-37 159.5 229 43.2
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.1e-37 158.7 161 51.6
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 5.1e-37 158.7 228 46.1
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 1.9e-36 156.8 216 46.3
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.3e-36 156.0 212 44.8
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 5.7e-36 155.2 220 45.9
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 1.3e-35 154.1 231 43.3
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.3e-35 154.1 219 45.2
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.6e-35 153.7 214 45.3
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.8e-35 152.9 216 44.4
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 4.8e-35 152.1 242 43.4
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 8.2e-35 151.4 219 44.7
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.1e-34 151.0 226 43.4
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.4e-34 150.6 210 44.3
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 1.4e-34 150.6 221 42.1
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.8e-34 150.2 233 41.2
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 5.3e-34 148.7 205 44.4
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 5.9e-33 145.2 208 41.8
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 5.9e-33 145.2 227 42.7
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 7.7e-33 144.8 215 43.7
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 2.9e-32 142.9 204 44.6
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 3.8e-32 142.5 223 44.4
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 5.0e-32 142.1 178 46.6
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.4e-31 140.6 203 44.8
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 7.2e-31 138.3 268 39.2
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 1.6e-30 137.1 208 42.8
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 2.1e-30 136.7 218 38.5
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 2.1e-30 136.7 196 43.9
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.7e-30 136.3 209 43.5
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.0e-29 134.4 224 42.4
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 1.4e-29 134.0 224 41.1
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.8e-29 133.7 224 41.1
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.8e-29 133.7 220 41.4
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 3.9e-29 132.5 227 40.1
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 5.1e-29 132.1 196 42.9
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 6.7e-29 131.7 203 41.9
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.1e-28 131.0 219 40.2
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.0e-28 130.2 228 39.5
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 2.0e-28 130.2 170 47.1
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 4.4e-28 129.0 238 37.4
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.7e-27 127.1 181 42.0
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 2.8e-27 126.3 218 39.9
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 3.7e-27 125.9 231 38.5
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 4.1e-26 122.5 218 39.4
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 1.2e-25 120.9 221 36.7
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.5e-25 120.6 219 36.5
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 2.6e-25 119.8 221 36.7
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 5.9e-25 118.6 207 38.2
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 1.3e-24 117.5 218 35.3
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 1.3e-24 117.5 219 37.9
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.7e-24 117.1 182 44.0
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.9e-24 116.3 219 36.1
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 5.0e-24 115.5 208 38.5
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 1.4e-23 114.0 235 34.5
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 1.9e-23 113.6 223 39.5
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 2.5e-23 113.2 224 37.9
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 3.2e-23 112.8 219 37.0
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 9.4e-23 111.3 108 49.1
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 2.7e-22 109.8 196 37.8
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 2.7e-22 109.8 209 38.3
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 6.1e-22 108.6 200 37.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 1.0e-21 107.8 206 35.0
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.8e-21 107.1 209 36.4
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 2.3e-21 106.7 197 37.1
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 3.0e-21 106.3 209 37.8
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 6.7e-21 105.1 155 42.6
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 8.8e-21 104.8 209 37.3
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 8.8e-21 104.8 173 36.4
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 1.1e-20 104.4 78 62.8
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 4.8e-19 99.0 212 35.8
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 8.2e-19 98.2 211 34.1
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.1e-18 97.8 160 43.8
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.4e-18 96.7 199 36.2
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 4.1e-18 95.9 210 35.7
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 5.3e-18 95.5 102 49.0
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 5.3e-18 95.5 179 38.5
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 7.0e-18 95.1 209 33.5
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 7.7e-17 91.7 234 33.8
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 5.0e-16 89.0 164 34.1
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 6.5e-16 88.6 247 32.0
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 5.2e-13 79.0 170 33.5
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 2.0e-12 77.0 141 36.9
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 2.6e-12 76.6 68 52.9
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 2.6e-12 76.6 159 37.1
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 3.3e-12 76.3 210 31.4
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.8e-11 73.2 152 34.9
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 8.2e-11 71.6 152 34.9
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.2e-08 63.5 139 35.3
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 1.9e-07 60.5 211 27.5
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 3.6e-06 56.2 35 62.9


User provided reference genes

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