Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.7e-129 464.9 243 100.0
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.4e-112 409.1 235 92.8
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 7.8e-111 404.1 235 91.9
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.3e-60 237.3 244 57.0
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.4e-59 233.8 251 54.6
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 4.8e-52 208.8 244 50.8
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.4e-46 190.7 235 50.2
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 3.3e-45 186.0 222 52.3
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.7e-45 185.3 239 44.8
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.2e-44 183.3 245 46.5
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.8e-44 183.0 217 47.9
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.4e-43 179.9 245 45.7
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 2.5e-40 169.9 250 43.6
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 2.5e-40 169.9 218 51.4
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 5.5e-40 168.7 241 44.4
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 2.1e-39 166.8 243 44.9
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.1e-39 166.8 231 43.3
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.7e-39 166.4 231 42.9
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.6e-39 166.0 260 40.8
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 8.0e-39 164.9 255 41.2
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.4e-38 164.1 243 41.6
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.4e-38 164.1 135 59.3
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 2.3e-38 163.3 233 41.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 1.2e-37 161.0 230 44.3
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 9.7e-37 157.9 247 42.9
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 9.7e-37 157.9 231 41.1
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 4.8e-36 155.6 255 40.4
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 6.3e-36 155.2 209 45.9
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.4e-35 154.1 196 43.9
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.4e-35 153.3 241 41.5
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 4.1e-35 152.5 239 41.4
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.2e-34 151.0 241 41.5
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 2.0e-34 150.2 244 42.6
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.7e-34 149.8 245 42.0
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 4.5e-34 149.1 245 41.2
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 7.7e-34 148.3 254 38.6
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.0e-33 147.9 241 40.2
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.3e-33 147.5 234 40.6
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 1.7e-33 147.1 249 38.6
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.2e-33 146.7 236 40.7
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.9e-33 146.4 240 40.0
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 3.8e-33 146.0 248 37.9
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 6.5e-33 145.2 239 41.8
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 8.5e-33 144.8 231 42.0
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 9.4e-32 141.4 241 38.6
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 2.1e-31 140.2 233 42.5
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 4.7e-31 139.0 258 39.5
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.8e-30 137.1 246 38.6
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 4.0e-30 136.0 179 46.4
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 8.8e-30 134.8 286 35.3
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 7.5e-29 131.7 235 38.7
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 9.8e-29 131.3 231 37.7
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 9.8e-29 131.3 246 36.6
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 2.8e-28 129.8 231 39.0
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 8.3e-28 128.3 230 39.1
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 3.1e-27 126.3 133 55.6
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.2e-26 124.4 217 39.2
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 3.5e-26 122.9 231 35.1
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.3e-25 120.9 244 34.8
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.9e-25 119.8 231 36.8
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 6.6e-25 118.6 205 39.5
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 5.5e-24 115.5 227 36.6
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.2e-23 114.4 225 36.9
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.6e-23 114.0 225 38.2
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.6e-23 114.0 235 35.7
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 2.1e-23 113.6 180 40.6
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 6.8e-22 108.6 169 42.6
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 6.8e-22 108.6 158 40.5
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 2.6e-21 106.7 244 38.1
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 3.4e-21 106.3 66 71.2
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 4.4e-21 105.9 247 35.6
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 4.4e-21 105.9 139 43.9
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 4.4e-21 105.9 132 43.9
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 5.7e-21 105.5 142 45.8
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 1.3e-20 104.4 188 37.8
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.2e-20 103.6 181 40.3
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 4.9e-20 102.4 181 36.5
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 6.3e-20 102.1 184 37.5
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.3e-20 101.7 168 41.7
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 8.3e-20 101.7 123 42.3
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 8.3e-20 101.7 151 41.7
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.8e-19 100.5 249 33.3
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.2e-19 99.8 237 33.3
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 3.2e-19 99.8 163 37.4
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.1e-19 99.4 137 43.1
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 7.0e-19 98.6 149 42.3
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 9.2e-19 98.2 239 32.6
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.2e-18 97.8 245 31.0
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 2.0e-18 97.1 174 41.4
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 7.8e-18 95.1 160 36.2
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.0e-17 94.7 148 39.2
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.0e-17 94.7 242 32.2
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.3e-17 93.6 242 31.0
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 2.9e-17 93.2 207 32.4
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 2.9e-17 93.2 170 35.9
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 5.0e-17 92.4 247 32.0
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 6.6e-17 92.0 176 42.0
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.1e-16 91.3 248 32.3
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.9e-16 90.5 151 38.4
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.9e-16 90.5 130 38.5
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.3e-16 89.4 244 31.6
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.3e-16 89.4 244 31.6
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 5.6e-16 89.0 248 31.0
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.2e-15 87.8 242 30.2
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.6e-15 87.4 231 30.7
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 1.6e-15 87.4 248 31.0
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 2.8e-15 86.7 106 39.6
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 3.1e-14 83.2 189 35.4
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 8.9e-14 81.6 198 33.3
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 8.9e-14 81.6 148 35.8
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 8.9e-14 81.6 148 35.8
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 8.9e-14 81.6 217 29.5
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 4.4e-13 79.3 51 66.7
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 2.2e-12 77.0 242 33.1
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 6.4e-12 75.5 188 32.4
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 8.3e-12 75.1 176 32.4
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.4e-11 74.3 228 30.7
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 2.4e-11 73.6 238 26.9
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 4.1e-11 72.8 201 31.3
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 5.4e-11 72.4 243 30.5
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 5.4e-11 72.4 178 36.5
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 9.2e-11 71.6 175 33.1
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 1.2e-10 71.2 177 37.9
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 2.0e-10 70.5 177 29.9
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 7.8e-10 68.6 187 31.6
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 3.9e-09 66.2 146 37.0
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 6.6e-09 65.5 129 36.4
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.5e-08 64.3 277 27.1
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 4.7e-07 59.3 189 28.0


User provided reference genes

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