Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 6.3e-120 434.1 217 100.0
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 2.3e-85 319.3 214 74.8
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 8.3e-80 300.8 214 70.6
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 1.4e-79 300.1 215 71.6
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.4e-79 299.3 214 70.6
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 4.1e-79 298.5 215 72.1
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 1.2e-78 297.0 217 71.9
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 3.5e-78 295.4 216 72.2
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 1.3e-77 293.5 217 71.4
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 3.0e-77 292.4 216 70.8
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.9e-77 292.0 216 70.4
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 5.0e-77 291.6 215 68.8
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 1.1e-76 290.4 217 68.7
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 8.1e-75 284.3 216 69.9
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 3.1e-74 282.3 216 68.5
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 3.1e-74 282.3 216 68.5
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 4.0e-74 282.0 217 66.8
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 6.8e-74 281.2 215 67.4
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 8.9e-74 280.8 208 70.7
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 1.2e-73 280.4 210 66.2
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 4.4e-73 278.5 216 67.1
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 1.3e-72 276.9 201 68.2
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 1.3e-72 276.9 214 67.8
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 3.7e-72 275.4 201 67.7
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 2.4e-71 272.7 216 65.7
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 9.2e-71 270.8 201 70.6
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 1.2e-70 270.4 215 65.1
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 1.2e-70 270.4 213 66.2
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 1.6e-70 270.0 215 64.2
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.6e-70 270.0 221 64.3
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 1.0e-69 267.3 214 65.0
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 1.3e-69 266.9 220 64.5
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 2.3e-69 266.2 216 63.9
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 2.3e-69 266.2 216 63.9
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 3.9e-69 265.4 143 86.0
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 1.1e-68 263.8 211 64.9
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 1.1e-68 263.8 218 63.8
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.5e-68 263.5 218 64.7
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.9e-68 263.1 202 66.8
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 2.5e-68 262.7 218 62.8
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 5.6e-68 261.5 208 66.3
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 9.5e-68 260.8 208 65.9
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 1.6e-67 260.0 215 63.7
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 1.6e-67 260.0 216 63.9
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.6e-67 260.0 218 63.3
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 2.8e-67 259.2 198 67.7
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 4.7e-67 258.5 208 65.4
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 8.1e-67 257.7 213 62.9
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 8.1e-67 257.7 215 62.3
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 8.1e-67 257.7 214 63.1
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 1.1e-66 257.3 219 63.9
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.8e-66 256.5 218 62.8
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.3e-66 256.1 139 86.3
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.3e-66 256.1 208 66.3
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 3.1e-66 255.8 216 63.4
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 5.2e-66 255.0 216 62.0
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 6.8e-66 254.6 220 61.4
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 8.9e-66 254.2 214 63.1
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 1.5e-65 253.4 188 70.7
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 2.0e-65 253.1 210 63.8
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 2.6e-65 252.7 209 63.2
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 5.8e-65 251.5 217 62.7
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 2.2e-64 249.6 207 63.3
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 2.9e-64 249.2 209 63.6
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 1.1e-63 247.3 214 58.9
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.4e-63 246.9 211 63.5
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.4e-63 246.1 207 63.3
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 3.2e-63 245.7 219 61.2
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 7.1e-63 244.6 206 64.1
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 2.1e-62 243.0 213 62.4
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 2.1e-62 243.0 207 60.4
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 7.8e-62 241.1 217 61.3
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 7.8e-62 241.1 204 61.8
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 2.3e-61 239.6 211 61.1
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 3.0e-61 239.2 207 61.4
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 3.9e-61 238.8 211 60.2
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 5.1e-61 238.4 216 58.8
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 6.6e-61 238.0 209 61.2
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 8.6e-61 237.7 207 60.4
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 1.1e-60 237.3 209 60.3
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 1.5e-60 236.9 211 60.2
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.5e-60 236.1 211 60.2
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 2.5e-60 236.1 211 60.2
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 4.3e-60 235.3 229 60.3
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 8.1e-59 231.1 207 60.4
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 1.4e-58 230.3 209 60.3
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 3.1e-58 229.2 202 59.9
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.1e-58 229.2 195 64.1
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 4.4e-57 225.3 182 63.7
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 5.8e-57 224.9 128 81.2
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 1.3e-56 223.8 202 59.4
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 4.9e-56 221.9 121 83.5
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 6.4e-56 221.5 154 69.5
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.3e-53 213.0 197 57.4
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 3.0e-53 212.6 208 57.7
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 5.1e-53 211.8 216 53.7
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 1.1e-50 204.1 126 75.4
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 3.6e-43 179.1 214 49.1
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 4.8e-43 178.7 157 61.8
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 2.4e-42 176.4 143 59.4
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.5e-41 173.7 133 61.7
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 5.8e-41 171.8 113 69.9
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 1.1e-39 167.5 100 79.0
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 3.2e-39 166.0 128 61.7
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 1.1e-36 157.5 112 64.3
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 1.1e-34 151.0 89 78.7
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 3.4e-33 146.0 183 49.2
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.3e-32 144.1 193 50.3
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 3.6e-22 109.4 119 52.1
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 1.3e-21 107.5 74 68.9
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 8.7e-21 104.8 121 53.7


User provided reference genes

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