Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 1.4e-147 526.2 255 100.0
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 1.8e-118 429.5 254 82.3
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 2.2e-108 396.0 288 69.4
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 7.9e-106 387.5 250 76.0
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 3.9e-105 385.2 252 75.0
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 5.1e-105 384.8 254 74.8
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 5.1e-105 384.8 255 74.9
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 6.7e-105 384.4 250 75.6
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.5e-104 383.3 248 77.8
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 2.6e-104 382.5 237 78.1
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 5.7e-104 381.3 253 74.7
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 7.4e-104 380.9 247 75.3
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.7e-103 379.8 254 73.2
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.7e-103 379.8 253 74.3
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 4.8e-103 378.3 249 75.1
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 8.2e-103 377.5 256 73.0
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.1e-102 377.1 249 73.5
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.1e-102 377.1 247 74.5
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 1.8e-102 376.3 253 73.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 5.3e-102 374.8 239 77.8
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.2e-101 373.6 253 73.1
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.5e-101 373.2 251 72.5
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.5e-101 373.2 247 75.3
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 2.0e-101 372.9 236 75.8
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 2.6e-101 372.5 247 75.3
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 5.9e-101 371.3 245 77.1
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 7.7e-101 370.9 247 73.7
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.0e-100 370.5 248 73.8
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.7e-100 369.8 250 72.4
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 6.5e-100 367.9 200 85.5
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 8.5e-100 367.5 221 78.3
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 1.1e-99 367.1 198 84.8
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 1.9e-99 366.3 255 70.6
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 3.2e-99 365.5 259 71.8
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.2e-98 363.6 206 80.1
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.2e-98 363.6 223 78.0
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.6e-98 363.2 250 70.4
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 2.1e-98 362.8 222 77.0
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.1e-98 362.8 201 82.6
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.1e-98 362.8 195 84.6
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 2.7e-98 362.5 254 70.1
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 3.6e-98 362.1 254 70.9
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 6.1e-98 361.3 206 81.1
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 8.0e-98 360.9 235 72.8
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 8.0e-98 360.9 249 71.1
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.0e-97 360.5 229 76.9
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.4e-97 360.1 222 76.6
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 5.2e-97 358.2 254 70.5
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 8.8e-97 357.5 253 71.9
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.5e-96 356.7 249 71.9
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 2.0e-96 356.3 194 83.0
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 2.6e-96 355.9 212 78.8
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 3.3e-96 355.5 253 69.6
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 4.4e-96 355.1 221 76.9
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.3e-95 353.6 253 69.6
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 2.2e-95 352.8 236 72.0
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 2.2e-95 352.8 195 82.6
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 2.8e-95 352.4 217 77.0
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.8e-95 352.4 227 72.7
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 4.8e-95 351.7 205 79.5
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 8.2e-95 350.9 238 71.0
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.1e-94 350.5 244 70.5
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.4e-94 350.1 195 81.5
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 2.4e-94 349.4 254 68.9
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 9.1e-94 347.4 195 82.1
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 1.6e-93 346.7 206 79.1
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 5.9e-93 344.7 240 70.8
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 5.9e-93 344.7 233 71.2
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 7.7e-93 344.4 229 72.5
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.3e-92 343.6 224 71.9
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 1.3e-92 343.6 220 75.0
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 2.2e-92 342.8 208 77.4
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 2.9e-92 342.4 213 76.5
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 2.5e-91 339.3 209 76.6
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 9.7e-88 327.4 231 68.8
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 1.7e-87 326.6 193 76.7
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.2e-87 326.2 238 66.0
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 2.8e-87 325.9 234 70.1
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 5.9e-85 318.2 225 68.9
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 6.5e-84 314.7 259 62.5
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 8.5e-84 314.3 211 71.6
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.2e-83 312.0 208 72.1
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 5.2e-81 305.1 206 72.8
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.5e-80 303.5 197 74.6
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.3e-79 300.4 207 66.7
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.6e-77 293.5 200 71.5
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.3e-76 290.4 192 67.2
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 3.8e-76 288.9 169 79.9
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 7.2e-75 284.6 214 62.6
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 7.2e-75 284.6 228 65.4
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 2.3e-73 279.6 223 63.7
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 3.0e-73 279.3 175 69.1
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 1.1e-70 270.8 183 67.2
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 7.3e-67 258.1 207 63.8
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 2.1e-66 256.5 191 67.0
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 9.2e-62 241.1 148 73.6
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.2e-56 224.2 207 57.5
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.4e-56 222.6 196 59.2
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.2e-55 219.9 174 59.8
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 6.4e-55 218.4 137 75.9
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.0e-52 211.1 197 52.3
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 3.0e-52 209.5 199 54.8
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 2.8e-50 203.0 200 55.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 4.9e-47 192.2 153 64.1
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 2.3e-44 183.3 102 80.4
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.4e-41 173.3 106 74.5
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.7e-39 167.2 149 50.3
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 5.6e-27 125.6 71 83.1
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 8.1e-26 121.7 79 70.9
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 7.6e-24 115.2 188 39.9
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 9.3e-14 81.6 58 70.7


User provided reference genes

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