Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 2.5e-190 668.7 358 100.0
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.1e-47 194.9 362 36.5
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 1.1e-47 194.9 362 34.8
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 5.1e-42 176.0 334 32.0
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 1.9e-41 174.1 350 33.7
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 7.4e-41 172.2 345 33.3
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 9.0e-39 165.2 345 33.3
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 4.9e-37 159.5 350 31.7
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 3.5e-35 153.3 327 31.5
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 9.6e-33 145.2 356 31.2
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 3.1e-31 140.2 345 28.1
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 4.0e-31 139.8 345 28.4
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 6.5e-29 132.5 335 30.4
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 7.1e-28 129.0 330 30.3
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 3.5e-27 126.7 347 29.7
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 1.3e-26 124.8 330 28.8
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.1e-26 122.9 347 29.4
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 8.7e-26 122.1 350 27.7
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 8.7e-26 122.1 333 29.7
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 1.9e-25 120.9 327 29.1
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 7.4e-25 119.0 353 28.6
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.3e-24 118.2 343 29.2
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 3.1e-23 113.6 346 28.6
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.0e-22 110.9 357 25.8
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.0e-21 106.3 353 25.5
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 8.5e-21 105.5 351 26.2
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.9e-20 104.4 352 25.0
SGA_v2.0_scaffold69G23067 Striga asiatica HOM05D007354 ORTHO05D006294 1.9e-20 104.4 364 26.9
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.9e-20 104.4 310 28.1
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 7.2e-20 102.4 344 25.9
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 9.4e-20 102.1 352 27.0
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 4.6e-19 99.8 324 26.9
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 6.1e-19 99.4 337 25.5
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.8e-18 97.8 336 25.3
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.0e-18 97.1 354 25.1
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.9e-18 96.7 341 24.9
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.9e-18 96.7 367 26.4
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 8.8e-18 95.5 351 26.2
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 8.8e-18 95.5 340 24.7
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 1.5e-17 94.7 358 25.7
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.5e-17 94.0 340 25.0
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 5.7e-17 92.8 337 24.9
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 7.4e-17 92.4 110 40.0
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 4.8e-16 89.7 275 28.0
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 8.2e-16 89.0 344 24.1
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 8.2e-16 89.0 355 23.9
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.1e-15 88.6 180 32.2
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 1.4e-15 88.2 359 25.6
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 1.8e-15 87.8 359 25.6
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 1.8e-15 87.8 359 24.8
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 4.1e-15 86.7 167 35.9
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.1e-15 86.7 324 25.3
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 9.1e-15 85.5 163 31.3
SGA_v2.0_scaffold24G10326 Striga asiatica HOM05D011758 ORTHO05D006294 2.0e-14 84.3 130 41.5
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 2.6e-14 84.0 363 24.2
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 2.6e-14 84.0 168 32.1
SGA_v2.0_scaffold48G17988 Striga asiatica HOM05D011758 ORTHO05D006294 7.7e-14 82.4 346 26.3
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-13 81.3 267 26.2
SGA_v2.0_scaffold24G10321 Striga asiatica HOM05D011758 ORTHO05D006294 1.7e-13 81.3 92 41.3
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.0e-13 79.7 309 23.3
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 5.0e-13 79.7 103 39.8
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 5.0e-13 79.7 103 39.8
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 5.0e-13 79.7 335 23.6
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-12 78.6 342 24.6
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 2.5e-12 77.4 112 37.5
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.2e-12 76.6 171 33.9
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 9.4e-12 75.5 341 24.3
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.7e-11 73.9 97 37.1
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.6e-11 73.6 291 24.7
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.7e-11 73.2 157 30.6
SGA_v2.0_scaffold24G10382 Striga asiatica HOM05D011758 ORTHO05D006294 7.9e-11 72.4 108 39.8
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 1.4e-10 71.6 95 35.8
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.8e-10 71.2 121 37.2
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 2.3e-10 70.9 99 37.4
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 3.0e-10 70.5 315 22.9
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 8.8e-10 68.9 369 22.8
Aqoxy5G03968 Aquilegia oxysepala HOM05D001286 ORTHO05D000440 1.5e-09 68.2 111 35.1
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 2.0e-09 67.8 369 22.5
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 4.4e-09 66.6 134 27.6
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 4.4e-09 66.6 138 30.4
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 4.4e-09 66.6 99 36.4
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 9.7e-09 65.5 369 22.2
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 8.2e-08 62.4 348 25.3
Atru.chr9.1929 Acer truncatum HOM05D000151 ORTHO05D000074 1.4e-07 61.6 99 32.3
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.4e-07 61.6 343 25.4
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 1.8e-07 61.2 82 37.8
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 2.4e-07 60.8 102 35.3
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.5e-06 58.2 345 21.4
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 3.5e-06 57.0 102 29.4
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 5.9e-06 56.2 294 22.4
Sopen04g019640 Solanum pennellii HOM05D000151 ORTHO05D000074 7.7e-06 55.8 111 34.2


User provided reference genes

Program Settings