Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 5.9e-135 484.2 240 100.0
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 3.4e-74 282.3 237 63.7
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.3e-69 265.8 232 62.5
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 1.1e-67 260.8 245 58.8
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 1.2e-66 257.3 238 59.7
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 5.8e-66 255.0 222 60.8
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 7.6e-66 254.6 239 58.2
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 9.9e-66 254.2 239 58.6
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.9e-64 250.0 239 57.7
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 5.4e-64 248.4 215 63.3
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 5.4e-64 248.4 203 63.5
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 1.2e-63 247.3 239 58.6
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 6.0e-63 245.0 240 57.5
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 7.8e-63 244.6 214 61.7
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 3.9e-62 242.3 242 57.9
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 5.1e-62 241.9 226 59.3
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 8.6e-62 241.1 206 61.7
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.5e-61 240.4 242 54.5
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.5e-61 239.6 242 55.8
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 7.3e-61 238.0 256 54.7
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 3.6e-60 235.7 232 58.2
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 5.2e-59 231.9 241 54.4
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 8.9e-59 231.1 245 53.9
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 8.9e-59 231.1 232 55.6
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 8.9e-59 231.1 215 58.1
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.5e-58 230.3 250 55.2
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 2.0e-58 229.9 236 55.1
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 2.2e-57 226.5 219 58.4
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 2.2e-57 226.5 218 55.0
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 2.2e-57 226.5 213 60.1
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 1.4e-56 223.8 238 52.9
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.9e-56 223.4 232 53.4
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.9e-56 223.4 214 59.8
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 3.2e-56 222.6 212 57.5
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 3.2e-56 222.6 212 57.1
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 3.2e-56 222.6 238 56.3
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 5.4e-56 221.9 235 51.9
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 7.1e-56 221.5 232 53.0
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 1.2e-55 220.7 232 53.0
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 1.6e-55 220.3 237 52.3
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 1.6e-55 220.3 214 59.8
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 2.1e-55 219.9 247 52.2
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.7e-55 219.5 238 55.9
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 1.7e-54 216.9 219 55.3
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 2.3e-54 216.5 232 52.6
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 2.3e-54 216.5 240 53.3
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 2.3e-54 216.5 234 54.7
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 3.9e-54 215.7 232 53.0
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 3.9e-54 215.7 205 57.6
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 3.9e-54 215.7 248 54.0
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.5e-53 213.8 235 52.3
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.9e-53 213.4 243 51.4
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 2.5e-53 213.0 238 52.5
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 3.3e-53 212.6 237 51.5
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 3.3e-53 212.6 209 56.0
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 4.3e-53 212.2 239 49.8
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 7.3e-53 211.5 213 53.1
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 9.6e-53 211.1 229 51.5
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 1.3e-52 210.7 241 52.7
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 2.8e-52 209.5 237 51.9
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 8.1e-52 208.0 217 55.8
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 1.4e-51 207.2 243 51.9
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 2.4e-51 206.5 214 53.7
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.4e-51 206.5 237 47.7
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 4.0e-51 205.7 236 53.8
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 5.3e-51 205.3 242 48.3
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 5.3e-51 205.3 244 51.2
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.0e-51 204.5 238 53.4
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 1.2e-50 204.1 208 53.8
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 1.2e-50 204.1 233 53.6
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.5e-50 203.8 195 55.9
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 2.6e-50 203.0 232 52.2
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 9.9e-50 201.1 238 49.2
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 2.2e-49 199.9 239 48.1
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 3.8e-49 199.1 196 57.7
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 4.9e-49 198.7 263 47.5
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 1.4e-48 197.2 215 51.2
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 1.9e-48 196.8 236 47.9
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 2.4e-48 196.4 279 44.1
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 3.2e-48 196.1 194 58.2
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 4.2e-48 195.7 217 50.7
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 5.4e-48 195.3 213 50.7
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 7.1e-48 194.9 210 54.3
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 7.1e-48 194.9 209 51.7
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 9.3e-48 194.5 230 46.5
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 1.2e-47 194.1 220 51.8
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 1.2e-47 194.1 247 45.7
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 1.6e-47 193.7 217 50.2
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 4.6e-47 192.2 212 53.3
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 7.9e-47 191.4 228 48.2
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 1.8e-46 190.3 288 42.7
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 2.3e-46 189.9 241 46.9
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 5.1e-46 188.7 216 51.9
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 6.7e-46 188.3 216 51.9
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 6.7e-46 188.3 216 51.9
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.5e-45 187.2 225 48.9
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 1.9e-45 186.8 213 51.6
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 5.6e-45 185.3 236 44.9
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 9.6e-45 184.5 216 51.9
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 9.6e-45 184.5 231 48.1
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 9.6e-45 184.5 241 46.5
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 2.1e-44 183.3 197 51.8
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 2.1e-44 183.3 197 51.8
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 1.1e-43 181.0 221 47.1
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 1.8e-43 180.3 238 44.1
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 4.0e-43 179.1 188 54.8
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.5e-42 177.2 197 51.3
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 5.8e-42 175.3 227 47.6
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 9.3e-40 167.9 207 48.3
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 2.1e-39 166.8 211 47.9
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 1.8e-38 163.7 218 46.8
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 3.3e-37 159.5 172 54.1
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 6.2e-36 155.2 188 48.9
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 1.8e-35 153.7 185 50.3
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 3.1e-35 152.9 177 50.3
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 5.3e-35 152.1 185 49.7
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 5.3e-35 152.1 184 50.0
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 5.3e-35 152.1 185 49.7
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 1.2e-34 151.0 191 47.6
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.2e-34 151.0 185 49.7
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.0e-33 147.9 213 49.3
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 4.1e-27 125.9 136 55.1
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 2.2e-25 120.2 225 36.0
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 5.5e-24 115.5 241 39.8
Sc02g0004030 Simmondsia chinensis HOM05D006151 ORTHO05D007487 4.5e-18 95.9 161 42.9
Peaxi162Scf00476g00615 Petunia axillaris HOM05D002901 ORTHO05D003183 7.7e-18 95.1 91 64.8
GSVIVG01026618001 Vitis vinifera HOM05D006151 ORTHO05D007487 1.2e-15 87.8 90 54.4
Nn1g02131 Nelumbo nucifera HOM05D006151 ORTHO05D007487 2.6e-10 70.1 166 34.3
AUR62044379 Chenopodium quinoa HOM05D006151 ORTHO05D007487 5.9e-10 68.9 210 30.0
HPP92_019356 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.8e-06 57.4 107 42.1
Zm00001eb362470 Zea mays HOM05D037132 ORTHO05D037045 3.9e-06 56.2 97 39.2


User provided reference genes

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