Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00992 Erythranthe guttata HOM05D004540 ORTHO05D004852 5.3e-41 170.6 89 100.0
CiPaw.16G014800 Carya illinoinensis HOM05D004540 ORTHO05D004852 4.4e-11 71.2 83 48.2
Potri.005G189900 Populus trichocarpa HOM05D004540 ORTHO05D004852 1.4e-09 66.2 84 46.4
arahy.Tifrunner.gnm1.ann1.M3AF87 Arachis hypogaea HOM05D004540 ORTHO05D004852 1.8e-09 65.9 79 40.5
Hma1.2p1_1454F.1_g284340 Hydrangea macrophylla HOM05D004540 ORTHO05D004852 1.8e-09 65.9 83 51.8
Haze_17734 Corylus avellana HOM05D004540 ORTHO05D004852 4.1e-09 64.7 89 47.2
Hma1.2p1_0483F.1_g162780 Hydrangea macrophylla HOM05D004540 ORTHO05D004852 5.4e-09 64.3 83 50.6
Cfa018340 Carpinus fangiana HOM05D004540 ORTHO05D004852 1.6e-08 62.8 89 46.1
Lj5g0026068 Lotus japonicus HOM05D004540 ORTHO05D004852 1.6e-08 62.8 75 44.0
QL02p024551 Quercus lobata HOM05D004540 ORTHO05D004852 1.6e-08 62.8 83 45.8
Glyma.16G170400 Glycine max HOM05D004540 ORTHO05D004852 2.0e-08 62.4 89 40.4
Glyma.02G084000 Glycine max HOM05D004540 ORTHO05D004852 2.7e-08 62.0 57 50.9
Ciclev10003011m.g Citrus clementina HOM05D004540 ORTHO05D004852 7.8e-08 60.5 85 43.5
CiPaw.15G019000 Carya illinoinensis HOM05D004540 ORTHO05D004852 1.3e-07 59.7 89 41.6
Phvul.004G098900 Phaseolus vulgaris HOM05D004540 ORTHO05D004852 2.9e-07 58.5 59 47.5
TPR.G36647 Trifolium pratense HOM05D004540 ORTHO05D004852 2.9e-07 58.5 72 48.6
Manes.02G177000 Manihot esculenta HOM05D004540 ORTHO05D004852 6.6e-07 57.4 78 41.0
Phvul.007G078400 Phaseolus vulgaris HOM05D004540 ORTHO05D004852 6.6e-07 57.4 52 53.8
Thecc.08G147500 Theobroma cacao HOM05D004540 ORTHO05D004852 6.6e-07 57.4 91 40.7
CSS0005521 Camellia sinensis var. sinensis HOM05D004540 ORTHO05D004852 8.6e-07 57.0 79 48.1
Glyma.10G226800 Glycine max HOM05D004540 ORTHO05D004852 8.6e-07 57.0 52 53.8
Glyma.20G165500 Glycine max HOM05D004540 ORTHO05D004852 8.6e-07 57.0 52 53.8
MD05G1020400 Malus domestica HOM05D019963 ORTHO05D004852 1.1e-06 56.6 94 39.4
Manes.18G089800 Manihot esculenta HOM05D004540 ORTHO05D004852 1.1e-06 56.6 90 42.2
Medtr3g095690 Medicago truncatula HOM05D004540 ORTHO05D004852 1.5e-06 56.2 87 40.2
Lalb_Chr21g0305401 Lupinus albus HOM05D004540 ORTHO05D004852 5.6e-06 54.3 47 57.4
Lalb_Chr06g0161521 Lupinus albus HOM05D004540 ORTHO05D004852 9.5e-06 53.5 83 37.3
Potri.002G070401 Populus trichocarpa HOM05D004540 ORTHO05D004852 9.5e-06 53.5 52 53.8
Prupe.8G024400 Prunus persica HOM05D004540 ORTHO05D004852 9.5e-06 53.5 97 36.1


User provided reference genes

Program Settings