Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 2.6e-52 208.4 102 100.0
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.0e-44 182.2 97 86.6
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 2.6e-44 181.8 99 85.9
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 2.6e-44 181.8 99 85.9
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 1.2e-41 172.9 99 82.8
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 2.7e-41 171.8 99 76.8
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 3.6e-41 171.4 99 77.8
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 4.7e-41 171.0 99 79.8
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 8.0e-41 170.2 99 80.8
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 8.0e-41 170.2 99 79.8
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 1.0e-40 169.9 99 78.8
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 1.0e-40 169.9 99 80.8
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 1.4e-40 169.5 99 80.8
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 3.0e-40 168.3 99 76.8
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 4.0e-40 167.9 99 75.8
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 4.0e-40 167.9 99 77.8
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 4.0e-40 167.9 97 78.4
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 5.2e-40 167.5 97 75.3
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 5.2e-40 167.5 99 77.8
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 5.2e-40 167.5 97 77.3
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 8.8e-40 166.8 99 75.8
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 1.2e-39 166.4 99 75.8
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 1.2e-39 166.4 99 76.8
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.2e-39 166.4 99 75.8
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 1.5e-39 166.0 99 74.7
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 1.5e-39 166.0 99 75.8
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 2.0e-39 165.6 97 76.3
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 2.0e-39 165.6 99 75.8
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.6e-39 165.2 93 80.6
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.3e-39 164.9 99 77.8
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 3.3e-39 164.9 99 75.8
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 4.4e-39 164.5 98 73.5
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 5.7e-39 164.1 97 76.3
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 5.7e-39 164.1 99 75.8
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 7.5e-39 163.7 98 73.5
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 7.5e-39 163.7 98 73.5
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 9.7e-39 163.3 98 73.5
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 9.7e-39 163.3 95 78.9
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 9.7e-39 163.3 98 73.5
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.3e-38 162.9 97 75.3
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.3e-38 162.9 99 73.7
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.7e-38 162.5 99 74.7
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 2.8e-38 161.8 99 74.7
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 2.8e-38 161.8 97 76.3
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 2.8e-38 161.8 98 77.6
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 3.7e-38 161.4 97 74.2
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 3.7e-38 161.4 97 77.3
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 4.8e-38 161.0 99 75.8
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 4.8e-38 161.0 98 77.6
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 4.8e-38 161.0 98 73.5
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 6.3e-38 160.6 99 77.8
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 6.3e-38 160.6 99 75.8
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 8.2e-38 160.2 97 73.2
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.8e-37 159.1 99 70.7
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.8e-37 159.1 98 76.5
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 1.8e-37 159.1 98 74.5
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 1.8e-37 159.1 97 73.2
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.8e-37 159.1 96 74.0
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 1.8e-37 159.1 97 72.2
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.8e-37 159.1 99 71.7
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 2.4e-37 158.7 99 72.7
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.4e-37 158.7 98 76.5
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 2.4e-37 158.7 99 71.7
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 2.4e-37 158.7 98 72.4
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 3.1e-37 158.3 97 74.2
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 3.1e-37 158.3 97 74.2
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 4.1e-37 157.9 97 73.2
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 4.1e-37 157.9 99 71.7
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 4.1e-37 157.9 99 76.8
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 4.1e-37 157.9 99 76.8
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 4.1e-37 157.9 97 72.2
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 5.3e-37 157.5 99 72.7
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 7.0e-37 157.1 95 71.6
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 9.1e-37 156.8 97 74.2
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 9.1e-37 156.8 99 71.7
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.6e-36 156.0 99 70.7
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 1.6e-36 156.0 99 68.7
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.0e-36 155.6 93 74.2
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 4.5e-36 154.5 99 69.7
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 5.9e-36 154.1 97 71.1
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 5.9e-36 154.1 96 76.0
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 7.7e-36 153.7 97 71.1
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 1.0e-35 153.3 96 72.9
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 1.3e-35 152.9 97 71.1
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.7e-35 152.5 99 69.7
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 2.9e-35 151.8 93 72.0
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 5.0e-35 151.0 97 70.1
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 6.5e-35 150.6 97 69.1
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 1.1e-34 149.8 97 69.1
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 1.9e-34 149.1 97 69.1
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 2.5e-34 148.7 97 69.1
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 3.2e-34 148.3 97 68.0
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 4.2e-34 147.9 97 69.1
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 5.5e-34 147.5 97 69.1
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 7.2e-34 147.1 97 67.0
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 9.4e-34 146.7 96 70.8
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 9.4e-34 146.7 97 68.0
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 1.2e-33 146.4 92 70.7
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 2.1e-33 145.6 97 67.0
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 2.1e-33 145.6 97 67.0
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 2.1e-33 145.6 97 67.0
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 2.7e-33 145.2 97 67.0
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 3.6e-33 144.8 97 67.0
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 4.7e-33 144.4 99 64.6
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 8.0e-33 143.7 90 72.2
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 1.4e-32 142.9 97 67.0
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.8e-32 142.5 96 64.6
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 3.0e-32 141.7 97 64.9
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 8.8e-32 140.2 99 66.7
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 5.7e-31 137.5 96 65.6
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 9.8e-31 136.7 97 59.8
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 1.3e-30 136.3 97 61.9
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 4.8e-30 134.4 96 62.5
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 8.3e-30 133.7 96 61.5
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 2.3e-27 125.6 96 58.3
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 2.9e-27 125.2 97 62.9
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 4.2e-26 121.3 93 63.4
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 1.6e-25 119.4 93 59.1
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 2.8e-25 118.6 97 53.6
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 6.1e-25 117.5 97 54.6
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 1.8e-24 115.9 82 67.1
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 3.4e-23 111.7 68 77.9
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 4.4e-23 111.3 99 51.5
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 2.2e-22 109.0 67 76.1
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 3.1e-21 105.1 99 51.5
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 4.1e-21 104.8 84 56.0
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.2e-20 103.2 67 74.6
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 1.0e-19 100.1 64 64.1
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 8.0e-17 90.5 64 65.6
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 2.6e-15 85.5 56 75.0
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.2e-14 82.4 49 75.5
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 6.4e-14 80.9 96 44.8
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 2.4e-13 79.0 52 65.4
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 7.0e-13 77.4 45 75.6


User provided reference genes

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