Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00977 Erythranthe guttata HOM05D027784 ORTHO05D010674 0.0e+00 2961.4 1611 100.0
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 6.1e-127 460.3 2353 28.1
SalBow7G1875 Salvia bowleyana HOM05D027784 ORTHO05D010674 4.1e-83 314.7 1787 27.0
SGA_v2.0_scaffold108G30881 Striga asiatica HOM05D001241 ORTHO05D010674 1.7e-76 292.7 2017 26.3
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 5.6e-56 224.6 899 31.4
Sopen04g027650 Solanum pennellii HOM05D011323 ORTHO05D010674 1.2e-21 110.5 628 27.9
Solyc04g071660.3 Solanum lycopersicum HOM05D011323 ORTHO05D010674 2.2e-20 106.3 631 27.9
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 1.4e-19 103.6 360 34.4
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 4.2e-19 102.1 263 37.3
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 1.8e-14 86.7 105 43.8
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 1.8e-14 86.7 725 26.5
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 4.1e-14 85.5 388 30.2
Thecc.08G155200 Theobroma cacao HOM05D013130 ORTHO05D022454 9.1e-14 84.3 370 29.2
Manes.02G181350 Manihot esculenta HOM05D015223 ORTHO05D010674 2.0e-13 83.2 435 27.8
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 1.3e-12 80.5 641 26.4
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 6.5e-12 78.2 741 25.6
CARHR070280 Cardamine hirsuta HOM05D010491 ORTHO05D012559 8.5e-12 77.8 274 28.8
PGSC0003DMG400006365 Solanum tuberosum HOM05D011323 ORTHO05D010674 8.5e-12 77.8 863 24.7
COL.COLO4_29877 Corchorus olitorius HOM05D013130 ORTHO05D022454 1.1e-11 77.4 222 33.3
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 1.4e-11 77.0 603 25.2
Prupe.8G035200 Prunus persica HOM05D012764 ORTHO05D017940 1.4e-11 77.0 150 38.7
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 3.2e-11 75.9 254 31.1
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 3.2e-11 75.9 262 31.3
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 5.5e-11 75.1 733 26.6
Duzib116G0432 Durio zibethinus HOM05D013130 ORTHO05D022454 2.1e-10 73.2 489 26.0
MD05G1029500 Malus domestica HOM05D012764 ORTHO05D017940 2.7e-10 72.8 87 47.1
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 3.6e-10 72.4 89 44.9
Thhalv10018017m.g Eutrema salsugineum HOM05D010491 ORTHO05D012559 4.7e-10 72.0 240 30.0
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 8.0e-10 71.2 134 35.8
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 8.0e-10 71.2 142 38.0
CiPaw.16G010100 Carya illinoinensis HOM05D015223 ORTHO05D010674 6.7e-09 68.2 505 25.7
Lsat_1_v5_gn_1_4921 Lactuca sativa HOM05D011323 ORTHO05D010674 8.8e-09 67.8 216 31.5
Aa31LG4G6810 Aethionema arabicum HOM05D010491 ORTHO05D012559 1.1e-08 67.4 204 29.9
Sp5g31880 Schrenkiella parvula HOM05D010491 ORTHO05D012559 1.5e-08 67.0 276 26.4
Nn1g06053 Nelumbo nucifera HOM05D011323 ORTHO05D010674 3.3e-08 65.9 261 29.1
BolC6t38310H Brassica oleracea HOM05D010491 ORTHO05D012559 9.7e-08 64.3 84 41.7
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 2.2e-07 63.2 131 35.9
BcaC08g45512 Brassica carinata HOM05D010491 ORTHO05D012559 4.8e-07 62.0 43 60.5
C06p31820 Brassica napus HOM05D010491 ORTHO05D012559 4.8e-07 62.0 43 60.5
Cc10_g15020 Coffea canephora HOM05D011323 ORTHO05D010674 8.2e-07 61.2 529 24.6
Glyma.02G080700 Glycine max HOM05D028233 ORTHO05D015681 8.2e-07 61.2 49 57.1
Cfa018307 Carpinus fangiana HOM05D015223 ORTHO05D010674 1.1e-06 60.8 891 24.0
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 1.1e-06 60.8 668 22.9
Psat1g100480 Pisum sativum HOM05D014873 ORTHO05D015681 1.1e-06 60.8 68 45.6
TAR628G0624 Trochodendron aralioides HOM05D013130 ORTHO05D010674 1.1e-06 60.8 420 26.2
BcaB02g07074 Brassica carinata HOM05D010491 ORTHO05D012559 2.4e-06 59.7 61 47.5
A07p42390 Brassica napus HOM05D010491 ORTHO05D012559 2.4e-06 59.7 272 28.3
Dinv41063 Davidia involucrata HOM05D011323 ORTHO05D010674 3.1e-06 59.3 557 23.9
arahy.Tifrunner.gnm1.ann1.UU4M73 Arachis hypogaea HOM05D053442 ORTHO05D010674 5.3e-06 58.5 42 59.5
Glyma.16G165600 Glycine max HOM05D028233 ORTHO05D015681 7.0e-06 58.2 41 63.4
Phvul.004G092800 Phaseolus vulgaris HOM05D028233 ORTHO05D015681 7.0e-06 58.2 41 63.4
RcHm_v2.0_Chr6g0274831 Rosa chinensis HOM05D012764 ORTHO05D010674 9.1e-06 57.8 147 32.0
Hund26684 Selenicereus undatus HOM05D011323 ORTHO05D010674 9.1e-06 57.8 394 26.1


User provided reference genes

Program Settings