Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.3e-106 389.8 212 100.0
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 1.5e-62 243.4 231 62.8
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 7.6e-62 241.1 231 58.4
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 1.7e-61 240.0 225 60.0
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 6.1e-59 231.5 225 56.4
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 7.9e-59 231.1 225 59.6
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 2.3e-58 229.6 225 58.2
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 6.7e-58 228.0 225 57.8
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.1e-57 227.3 225 55.6
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 1.1e-57 227.3 225 58.7
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 1.9e-57 226.5 225 56.9
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 9.7e-57 224.2 225 57.8
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.3e-56 223.8 225 55.1
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 1.6e-56 223.4 231 55.4
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 2.8e-56 222.6 223 56.5
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 2.8e-56 222.6 223 56.5
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 2.8e-56 222.6 223 56.5
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 6.3e-56 221.5 229 55.5
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.1e-55 220.7 223 62.8
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 1.4e-55 220.3 228 56.6
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 1.8e-55 219.9 222 58.6
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 2.4e-55 219.5 227 57.3
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 6.9e-55 218.0 227 55.9
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 6.9e-55 218.0 227 55.9
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 1.5e-54 216.9 224 55.4
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 2.0e-54 216.5 225 56.0
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 3.4e-54 215.7 225 54.7
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 3.4e-54 215.7 226 56.2
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 4.5e-54 215.3 216 55.1
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 5.9e-54 214.9 218 56.0
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 5.9e-54 214.9 225 55.6
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 7.7e-54 214.5 226 54.0
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 1.0e-53 214.2 226 55.3
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 1.7e-53 213.4 216 53.7
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 1.7e-53 213.4 225 56.9
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 2.9e-53 212.6 227 53.3
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 3.8e-53 212.2 204 60.3
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 5.0e-53 211.8 225 54.7
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 1.4e-52 210.3 226 54.0
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 1.4e-52 210.3 225 55.6
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.9e-52 209.9 227 53.7
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 2.5e-52 209.5 224 54.5
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 3.2e-52 209.1 225 55.6
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 3.2e-52 209.1 226 53.5
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 5.5e-52 208.4 226 54.0
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 5.5e-52 208.4 225 54.2
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 9.4e-52 207.6 203 60.6
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 1.2e-51 207.2 229 53.7
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 1.6e-51 206.8 228 53.1
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 2.1e-51 206.5 228 53.9
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 4.6e-51 205.3 225 53.3
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 7.9e-51 204.5 233 54.9
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 1.4e-50 203.8 225 52.0
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 1.4e-50 203.8 222 53.6
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 1.8e-50 203.4 205 59.0
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 2.3e-50 203.0 225 52.9
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 2.3e-50 203.0 205 56.6
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 5.1e-50 201.8 224 51.3
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 8.8e-50 201.1 226 53.1
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 2.0e-49 199.9 210 57.1
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 4.3e-49 198.7 225 52.0
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 5.7e-49 198.4 225 51.1
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 5.7e-49 198.4 227 53.3
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.7e-48 196.8 227 52.4
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.7e-48 196.8 227 52.9
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 2.8e-48 196.1 218 51.4
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 6.3e-48 194.9 203 54.7
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 8.2e-48 194.5 225 51.6
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 8.2e-48 194.5 229 54.1
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.4e-47 193.7 220 50.9
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.4e-47 193.7 226 52.7
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.8e-47 193.4 226 52.2
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.8e-47 193.4 226 52.2
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 1.8e-47 193.4 226 50.4
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 1.8e-47 193.4 205 55.6
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.4e-47 193.0 216 53.7
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 3.1e-47 192.6 247 47.8
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 4.1e-47 192.2 200 56.5
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 4.1e-47 192.2 205 55.1
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 4.1e-47 192.2 200 56.0
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 5.3e-47 191.8 200 55.0
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 6.9e-47 191.4 226 51.8
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 2.0e-46 189.9 226 51.3
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 2.6e-46 189.5 223 53.4
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 3.4e-46 189.1 228 50.4
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 4.5e-46 188.7 226 51.8
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 1.3e-45 187.2 216 50.9
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 1.3e-45 187.2 217 53.0
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 5.0e-45 185.3 222 48.6
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 5.0e-45 185.3 201 52.2
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 4.2e-44 182.2 206 50.5
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 5.5e-44 181.8 218 49.5
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 9.4e-44 181.0 224 47.3
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 1.2e-43 180.6 202 53.0
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 2.7e-43 179.5 202 53.0
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.7e-43 179.5 201 54.2
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 3.6e-43 179.1 224 49.1
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 6.1e-43 178.3 212 50.0
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 1.0e-42 177.6 200 53.5
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 3.9e-42 175.6 216 50.9
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 3.3e-41 172.6 222 48.2
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 4.4e-41 172.2 203 51.7
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 5.7e-41 171.8 216 47.7
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 5.7e-41 171.8 201 52.2
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 5.7e-41 171.8 260 43.1
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 5.7e-41 171.8 201 53.2
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 9.7e-41 171.0 233 46.8
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.3e-40 170.6 200 52.5
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.3e-40 170.6 202 51.5
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 3.7e-40 169.1 206 50.5
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 6.3e-40 168.3 200 54.0
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 1.4e-39 167.2 224 46.0
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 4.1e-39 165.6 204 48.5
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 4.1e-39 165.6 223 47.1
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 4.1e-39 165.6 218 46.8
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 5.3e-39 165.2 219 45.7
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 9.1e-39 164.5 221 45.7
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 1.2e-38 164.1 196 50.5
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 1.6e-38 163.7 217 45.6
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 1.6e-38 163.7 216 45.4
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 2.0e-38 163.3 231 45.9
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 3.5e-38 162.5 226 46.5
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 5.9e-38 161.8 225 46.2
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.7e-37 160.2 226 46.0
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 2.2e-37 159.8 219 44.7
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 8.5e-37 157.9 230 44.8
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 8.5e-37 157.9 224 46.4
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 1.9e-36 156.8 234 45.7
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 4.2e-36 155.6 216 44.0
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 5.5e-36 155.2 223 47.5
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 6.1e-35 151.8 222 44.1
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 6.1e-35 151.8 223 45.3
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 2.3e-34 149.8 236 44.5
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 4.0e-34 149.1 226 44.7
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 6.7e-34 148.3 221 43.4
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 6.7e-34 148.3 218 43.1
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 1.1e-33 147.5 237 40.1
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 2.6e-33 146.4 205 48.8
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 3.3e-33 146.0 200 46.0
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 5.7e-33 145.2 226 44.7
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 7.5e-33 144.8 228 42.1
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 7.5e-33 144.8 187 46.5
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 2.8e-32 142.9 225 46.7
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 6.3e-32 141.7 223 43.0
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 1.4e-31 140.6 220 41.4
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 1.4e-31 140.6 220 41.4
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 1.8e-31 140.2 221 43.0
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 4.5e-30 135.6 191 42.9
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 2.9e-29 132.9 193 44.0
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 3.2e-28 129.4 229 43.7
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 5.5e-28 128.6 229 44.1
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 1.6e-27 127.1 197 42.1
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 8.0e-27 124.8 227 42.3
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 8.0e-27 124.8 167 47.9
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 4.0e-26 122.5 178 44.9
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 6.8e-26 121.7 230 41.7
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 6.8e-26 121.7 200 40.5
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 2.0e-25 120.2 200 42.5
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 1.7e-24 117.1 227 41.0
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.7e-24 117.1 95 68.4
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 4.8e-24 115.5 238 39.9
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 2.9e-21 106.3 244 35.7
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 3.8e-21 105.9 205 41.5
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 6.5e-21 105.1 234 39.3
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 4.2e-20 102.4 201 40.3
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 2.3e-18 96.7 91 54.9
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 2.9e-13 79.7 182 37.4
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 3.3e-12 76.3 215 38.6
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 1.2e-11 74.3 182 36.8
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 2.8e-11 73.2 242 33.9
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 1.4e-10 70.9 191 35.6
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 1.2e-09 67.8 173 33.5
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 5.7e-09 65.5 209 29.7
HPP92_002804 Vanilla planifolia HOM05D003947 ORTHO05D004614 4.1e-07 59.3 80 48.8
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 5.4e-07 58.9 151 29.8
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 7.0e-07 58.5 148 29.1
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 3.5e-06 56.2 152 32.9
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 3.5e-06 56.2 149 30.9
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 4.6e-06 55.8 148 30.4
Aa31LG10G780 Aethionema arabicum HOM05D007392 ORTHO05D009181 7.8e-06 55.1 73 45.2


User provided reference genes

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