Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.0e-223 777.7 376 100.0
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.1e-215 753.1 373 98.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 5.3e-175 617.8 346 83.2
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-174 616.7 372 78.2
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-174 616.7 371 77.9
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 7.4e-169 597.4 374 75.9
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 5.3e-167 591.3 371 74.9
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 2.2e-165 585.9 377 72.7
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 2.1e-163 579.3 394 71.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 2.3e-162 575.9 377 70.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.9e-156 556.2 344 74.4
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 3.2e-156 555.4 386 67.6
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.2e-155 553.5 352 72.7
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.7e-155 552.4 369 69.1
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 8.8e-154 547.4 356 71.1
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.2e-153 547.0 356 71.1
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.5e-153 546.6 378 68.3
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 2.6e-153 545.8 372 70.4
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 3.4e-153 545.4 400 64.8
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 3.4e-153 545.4 333 75.4
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 7.5e-153 544.3 356 70.8
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 9.8e-153 543.9 368 69.0
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.8e-152 542.3 382 67.5
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.8e-152 542.3 388 66.8
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.4e-151 540.0 388 66.8
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 4.1e-151 538.5 389 66.1
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 4.1e-151 538.5 376 67.0
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 7.0e-151 537.7 400 63.5
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 7.0e-151 537.7 389 66.3
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.0e-150 536.2 342 72.8
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.0e-150 536.2 342 72.8
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.0e-150 536.2 342 72.8
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 2.0e-150 536.2 389 66.1
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.5e-150 535.4 355 70.1
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 5.9e-150 534.6 361 69.5
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 7.7e-150 534.3 362 68.5
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 2.3e-149 532.7 384 66.4
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 2.9e-149 532.3 400 63.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 3.8e-149 531.9 342 71.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 5.0e-149 531.6 357 68.6
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 6.6e-149 531.2 341 70.4
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.1e-148 530.4 352 70.7
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.1e-148 530.4 366 68.3
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.9e-148 529.6 361 68.1
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.9e-148 529.6 361 69.3
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.5e-148 529.3 382 65.7
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.5e-148 529.3 397 62.5
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.2e-148 528.5 342 72.2
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 5.5e-148 528.1 376 65.7
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 7.2e-148 527.7 342 71.6
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 9.5e-148 527.3 373 67.6
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.2e-147 526.9 393 64.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.8e-147 525.8 354 68.1
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.8e-147 525.8 392 64.8
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 2.8e-147 525.8 344 71.2
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 3.6e-147 525.4 354 68.1
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 3.6e-147 525.4 375 65.6
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 3.6e-147 525.4 389 65.3
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 8.0e-147 524.2 341 71.0
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 1.0e-146 523.9 378 65.3
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.0e-146 523.9 349 69.3
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.4e-146 523.5 344 69.5
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-146 523.5 379 65.7
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.8e-146 523.1 379 64.4
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.8e-146 523.1 379 64.4
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.8e-146 523.1 379 64.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.8e-146 523.1 346 69.1
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.3e-146 522.7 346 68.8
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.3e-146 522.7 369 67.8
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.3e-146 522.7 361 68.4
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 3.0e-146 522.3 342 70.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 5.2e-146 521.5 350 68.6
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 6.8e-146 521.2 384 63.3
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 6.8e-146 521.2 344 69.8
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.0e-145 519.6 390 63.3
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 2.0e-145 519.6 401 63.6
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.4e-145 518.8 345 68.7
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 7.5e-145 517.7 372 65.9
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 9.8e-145 517.3 342 69.9
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 6.3e-144 514.6 400 61.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 8.3e-144 514.2 341 68.3
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 1.4e-143 513.5 369 66.4
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 3.2e-143 512.3 397 60.5
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 5.4e-143 511.5 340 69.7
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 7.0e-143 511.1 341 69.5
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 9.2e-143 510.8 341 69.8
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 2.7e-142 509.2 344 69.2
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.5e-142 508.8 342 67.8
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 5.9e-142 508.1 378 63.5
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.0e-141 507.3 366 64.5
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.3e-141 506.9 344 67.7
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.3e-141 506.1 344 66.9
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.9e-141 505.8 388 61.3
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.6e-141 504.6 367 64.0
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 6.6e-141 504.6 344 66.3
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 8.6e-141 504.2 348 69.3
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 8.6e-141 504.2 344 67.7
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.1e-140 503.8 359 63.8
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.5e-140 503.4 367 63.8
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 2.5e-140 502.7 350 65.7
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.3e-140 501.9 373 64.6
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.2e-139 500.4 371 65.0
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.6e-139 500.0 390 59.7
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.8e-139 499.2 369 64.2
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 6.1e-139 498.0 345 66.4
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 1.0e-138 497.3 345 66.4
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 6.8e-138 494.6 368 63.3
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.2e-137 493.8 346 65.9
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.2e-137 493.8 367 63.5
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.5e-137 493.4 344 66.3
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.4e-137 491.9 368 62.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.7e-136 490.0 377 61.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.4e-135 486.9 370 62.2
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 2.0e-134 483.0 343 68.2
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 3.9e-133 478.8 368 61.4
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 1.1e-132 477.2 356 62.6
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.2e-130 468.4 342 63.2
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 4.4e-129 465.3 344 63.4
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 4.9e-128 461.8 345 62.6
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 4.9e-128 461.8 402 58.7
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 4.1e-127 458.8 380 59.7
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-124 450.7 344 62.8
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-124 448.0 339 63.1
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 9.5e-124 447.6 376 59.6
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-123 446.8 339 62.8
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-123 446.4 375 59.5
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 8.1e-123 444.5 365 59.5
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-122 444.1 360 60.0
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.8e-122 443.4 354 61.9
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.0e-122 442.2 344 58.7
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 5.2e-122 441.8 338 63.6
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 6.8e-122 441.4 341 62.5
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.0e-121 439.9 401 54.6
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.7e-120 435.6 339 63.4
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-120 434.9 389 56.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 1.7e-117 426.8 289 66.1
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.1e-117 425.2 365 56.7
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.2e-115 418.3 365 55.9
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 3.1e-114 416.0 367 55.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 7.1e-111 404.8 349 54.4
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 9.3e-111 404.4 291 62.9
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 3.5e-110 402.5 398 49.7
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 6.0e-110 401.7 343 57.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.5e-108 397.1 367 53.4
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 4.3e-108 395.6 250 71.6
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.2e-105 387.5 343 55.1
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 6.4e-104 381.7 353 55.5
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 7.9e-102 374.8 305 58.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.3e-101 374.0 252 65.9
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.2e-99 365.2 356 50.8
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 8.1e-99 364.8 240 68.3
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.1e-98 364.4 241 68.5
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.0e-93 347.8 338 50.9
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.0e-93 346.3 347 47.8
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 9.6e-92 341.3 343 48.4
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.0e-90 334.7 348 46.8
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.6e-89 333.2 387 46.3
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.7e-88 330.5 237 62.0
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 5.3e-82 308.9 195 75.4
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 6.9e-82 308.5 237 57.0
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.0e-80 302.4 355 43.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.5e-80 302.0 347 44.1
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.0e-77 294.7 241 55.6
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.9e-77 292.7 339 44.0
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.1e-77 292.4 346 41.6
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.9e-76 290.4 301 47.5
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.8e-75 286.6 340 44.1
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.8e-75 285.8 358 42.2
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 4.8e-67 259.2 343 39.9
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 4.2e-63 246.1 378 37.3
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 5.9e-41 172.6 147 59.9
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.7e-40 171.0 154 57.8
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.8e-37 161.0 415 28.9
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.8e-22 110.5 100 49.0
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.4e-21 108.2 85 52.9
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.7e-19 101.3 79 51.9
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.7e-19 100.1 119 40.3
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.6e-16 89.0 86 45.3
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.4e-12 77.0 125 41.6
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.7e-09 67.4 67 37.3
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 3.5e-09 67.0 55 61.8


User provided reference genes

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