Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.4e-42 175.3 99 100.0
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 2.4e-42 175.3 99 100.0
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 4.6e-25 117.9 82 69.5
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 5.9e-25 117.5 79 72.2
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 7.8e-25 117.1 82 69.5
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 7.8e-25 117.1 79 72.2
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 2.3e-24 115.5 80 75.0
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 3.0e-24 115.2 79 72.2
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 1.1e-23 113.2 79 69.6
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 1.1e-23 113.2 82 68.3
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.9e-23 112.5 83 75.9
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 4.3e-23 111.3 80 72.5
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 9.5e-23 110.2 78 67.9
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.2e-22 109.8 83 67.5
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 1.8e-21 105.9 80 66.2
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 3.1e-21 105.1 79 63.3
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 4.0e-21 104.8 95 57.9
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 4.0e-21 104.8 77 70.1
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 6.8e-21 104.0 79 67.1
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 6.8e-21 104.0 69 78.3
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 6.8e-21 104.0 69 78.3
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 1.2e-20 103.2 81 70.4
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 1.5e-20 102.8 76 71.1
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 1.5e-20 102.8 83 66.3
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 2.6e-20 102.1 95 55.8
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 3.4e-20 101.7 95 56.8
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 3.4e-20 101.7 94 59.6
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 4.4e-20 101.3 95 55.8
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 5.8e-20 100.9 86 65.1
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 5.8e-20 100.9 80 65.0
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 5.8e-20 100.9 75 70.7
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 5.8e-20 100.9 95 57.9
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 7.5e-20 100.5 79 67.1
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 1.3e-19 99.8 69 73.9
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 1.3e-19 99.8 75 69.3
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 3.7e-19 98.2 93 61.3
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 3.7e-19 98.2 79 68.4
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 4.9e-19 97.8 76 68.4
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 4.9e-19 97.8 75 69.3
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 4.9e-19 97.8 84 60.7
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 1.4e-18 96.3 75 66.7
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 1.9e-18 95.9 74 68.9
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 2.4e-18 95.5 86 58.1
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 2.4e-18 95.5 74 63.5
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 3.2e-18 95.1 95 56.8
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 5.4e-18 94.4 92 57.6
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 5.4e-18 94.4 95 56.8
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 7.0e-18 94.0 75 66.7
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 1.2e-17 93.2 88 60.2
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 1.6e-17 92.8 77 63.6
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 1.6e-17 92.8 73 68.5
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 4.6e-17 91.3 77 64.9
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 6.0e-17 90.9 75 66.7
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 3.9e-16 88.2 76 64.5
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 5.0e-16 87.8 76 63.2
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 6.6e-16 87.4 79 62.0
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 1.5e-15 86.3 91 56.0
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 1.5e-15 86.3 84 57.1
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.9e-15 85.9 92 54.3
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 3.3e-15 85.1 76 61.8
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 1.4e-13 79.7 78 62.8
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.8e-13 79.3 74 60.8
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 2.3e-13 79.0 72 59.7
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 3.4e-12 75.1 75 60.0
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 1.7e-11 72.8 71 64.8
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 1.7e-11 72.8 71 64.8
Atru.chr13.153 Acer truncatum HOM05D008020 ORTHO05D010140 6.4e-11 70.9 67 53.7
Aa31LG9G12400 Aethionema arabicum HOM05D008020 ORTHO05D010140 1.4e-10 69.7 78 57.7
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 1.3e-08 63.2 91 50.5
Ciclev10003459m.g Citrus clementina HOM05D008020 ORTHO05D010140 8.6e-08 60.5 76 47.4
Prupe.1G355200 Prunus persica HOM05D008020 ORTHO05D010140 5.6e-07 57.8 59 57.6
Pp3c20_23510 Physcomitrium patens HOM05D008020 ORTHO05D010140 7.3e-07 57.4 94 39.4
QL02p013929 Quercus lobata HOM05D008020 ORTHO05D010140 8.1e-06 53.9 43 67.4


User provided reference genes

Program Settings