Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 3.3e-121 439.5 243 100.0
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 1.2e-78 298.1 244 66.8
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 3.5e-78 296.6 242 64.5
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 8.3e-64 248.8 233 57.5
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 3.3e-60 236.9 244 58.2
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 1.2e-59 235.0 244 57.0
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 1.2e-59 235.0 244 57.0
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 3.5e-54 216.9 239 51.5
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 1.1e-52 211.8 253 48.2
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 1.4e-50 204.9 244 52.5
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 1.8e-50 204.5 246 48.8
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 1.2e-49 201.8 244 48.0
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 2.4e-47 194.1 245 47.8
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 7.1e-47 192.6 239 46.9
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 1.2e-46 191.8 245 47.8
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 2.7e-46 190.7 246 47.2
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 2.7e-46 190.7 244 48.0
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 6.0e-46 189.5 241 45.6
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 6.0e-46 189.5 170 56.5
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 1.0e-45 188.7 252 45.6
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 2.3e-45 187.6 246 45.1
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 1.1e-44 185.3 244 49.2
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 1.1e-44 185.3 245 45.3
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.1e-44 185.3 169 55.6
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 1.1e-44 185.3 244 46.7
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 1.5e-44 184.9 239 45.2
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 1.9e-44 184.5 263 43.0
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 9.5e-44 182.2 244 44.3
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 3.6e-43 180.3 176 52.3
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 3.6e-43 180.3 252 43.3
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 1.1e-42 178.7 170 55.3
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 1.8e-42 177.9 249 43.8
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 2.3e-42 177.6 249 42.6
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 3.1e-42 177.2 171 56.7
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 8.9e-42 175.6 244 45.5
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 2.0e-41 174.5 244 43.0
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 7.6e-41 172.6 244 42.2
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 9.9e-41 172.2 245 45.7
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 1.7e-40 171.4 244 43.0
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 1.7e-40 171.4 170 56.5
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 4.9e-40 169.9 244 42.2
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 4.9e-40 169.9 247 46.2
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 4.9e-40 169.9 247 42.1
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 1.1e-39 168.7 118 69.5
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 1.1e-39 168.7 118 69.5
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 2.4e-39 167.5 245 40.4
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 7.8e-38 162.5 118 68.6
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 1.3e-37 161.8 244 41.8
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 1.3e-37 161.8 190 47.9
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 1.3e-37 161.8 165 53.3
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 1.7e-37 161.4 244 41.8
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 1.7e-37 161.4 238 41.2
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 1.7e-37 161.4 118 65.3
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 5.1e-37 159.8 163 50.3
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 8.6e-37 159.1 208 45.2
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 1.5e-36 158.3 251 39.4
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 2.5e-36 157.5 248 41.1
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 4.3e-36 156.8 244 43.9
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 1.2e-35 155.2 250 38.0
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 1.6e-35 154.8 244 42.6
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 8.1e-35 152.5 253 41.5
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 8.9e-34 149.1 195 42.1
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 1.2e-33 148.7 238 39.1
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 1.5e-33 148.3 195 42.1
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 9.9e-33 145.6 173 50.3
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 4.9e-32 143.3 199 42.7
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 2.4e-31 141.0 133 51.9
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 3.2e-31 140.6 207 44.4
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 5.4e-31 139.8 118 59.3
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 9.3e-31 139.0 162 46.3
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 9.3e-31 139.0 194 43.3
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 4.6e-30 136.7 212 40.6
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 9.6e-28 129.0 244 39.3
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 6.2e-27 126.3 208 40.4
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 6.2e-27 126.3 215 40.9
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 1.8e-26 124.8 153 45.1
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 2.4e-26 124.4 208 41.8
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 9.0e-26 122.5 221 38.9
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.2e-25 122.1 210 39.5
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 2.0e-25 121.3 189 38.6
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 4.2e-23 113.6 255 32.5
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 4.6e-22 110.2 129 48.8
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 7.9e-22 109.4 106 50.9
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 8.7e-21 105.9 211 33.6
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 4.8e-19 100.1 100 50.0
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 1.1e-15 89.0 180 32.8
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 2.7e-14 84.3 86 51.2
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 2.5e-12 77.8 78 51.3
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 3.7e-11 73.9 226 29.6
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 3.8e-08 63.9 38 81.6
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 1.4e-07 62.0 38 76.3
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 1.9e-07 61.6 38 76.3


User provided reference genes

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