Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00905 Erythranthe guttata HOM05D002826 ORTHO05D003105 1.1e-75 286.6 142 100.0
SGA_v2.0_scaffold145G36105 Striga asiatica HOM05D002826 ORTHO05D003105 5.2e-38 161.4 202 51.0
Migut.N03189 Erythranthe guttata HOM05D002826 ORTHO05D003105 1.1e-35 153.7 215 47.4
SalBow6G2958 Salvia bowleyana HOM05D002826 ORTHO05D003105 3.5e-34 148.7 216 45.8
Sopen04g035670 Solanum pennellii HOM05D002826 ORTHO05D003105 2.1e-31 139.4 209 45.0
Solyc04g082020.3 Solanum lycopersicum HOM05D002826 ORTHO05D003105 6.1e-31 137.9 209 44.5
SGA_v2.0_scaffold275G46539 Striga asiatica HOM05D002826 ORTHO05D003105 1.5e-29 133.3 208 44.2
SalBow7G0593 Salvia bowleyana HOM05D002826 ORTHO05D003105 2.6e-29 132.5 218 44.5
PGSC0003DMG400009958 Solanum tuberosum HOM05D002826 ORTHO05D003105 2.6e-29 132.5 209 43.5
Nitab4.5_0003030g0020 Nicotiana tabacum HOM05D002826 ORTHO05D003105 9.7e-29 130.6 212 42.5
Peaxi162Scf00174g01015 Petunia axillaris HOM05D002826 ORTHO05D003105 8.2e-28 127.5 211 41.7
unitig_744.g24605 Utricularia gibba HOM05D002826 ORTHO05D003105 1.1e-27 127.1 195 43.1
DCAR_013893 Daucus carota HOM05D002826 ORTHO05D003105 7.0e-27 124.4 207 43.5
Hma1.2p1_3012F.1_g331620 Hydrangea macrophylla HOM05D002826 ORTHO05D003105 7.0e-27 124.4 213 44.6
ECA232G0330 Erigeron canadensis HOM05D002826 ORTHO05D003105 2.7e-26 122.5 213 44.1
Dinv31898 Davidia involucrata HOM05D002826 ORTHO05D003105 3.5e-26 122.1 212 43.4
CAN.G311.81 Capsicum annuum HOM05D002826 ORTHO05D003105 5.9e-26 121.3 139 51.1
Lj4A802T110 Lonicera japonica HOM05D002826 ORTHO05D003105 1.7e-25 119.8 219 41.6
HanXRQChr11g0322251 Helianthus annuus HOM05D002826 ORTHO05D003105 2.9e-25 119.0 215 41.9
HanXRQChr06g0184841 Helianthus annuus HOM05D002826 ORTHO05D003105 6.5e-25 117.9 217 41.5
GSVIVG01008732001 Vitis vinifera HOM05D002826 ORTHO05D003105 1.5e-24 116.7 209 39.2
COL.COLO4_26077 Corchorus olitorius HOM05D002826 ORTHO05D003105 2.5e-24 115.9 207 40.6
Nn6g31897 Nelumbo nucifera HOM05D002826 ORTHO05D003105 9.4e-24 114.0 150 49.3
Cc10_g01070 Coffea canephora HOM05D002826 ORTHO05D003105 2.1e-23 112.8 172 44.2
CSS0023064 Camellia sinensis var. sinensis HOM05D002826 ORTHO05D003105 3.6e-23 112.1 215 40.9
PSO675G0007 Papaver somniferum HOM05D002826 ORTHO05D003105 8.0e-23 110.9 213 40.4
Dinv39561 Davidia involucrata HOM05D002826 ORTHO05D003105 1.0e-22 110.5 204 41.7
vmacro21847 Vaccinium macrocarpon HOM05D002826 ORTHO05D003105 1.0e-22 110.5 208 39.9
Cpa.g.sc26.255 Carica papaya HOM05D002826 ORTHO05D003105 1.4e-22 110.2 143 49.0
TAR628G1706 Trochodendron aralioides HOM05D002826 ORTHO05D003105 2.3e-22 109.4 167 47.3
Lsat_1_v5_gn_2_6900 Lactuca sativa HOM05D002826 ORTHO05D003105 3.0e-22 109.0 214 40.7
Rhsim06G0011300 Rhododendron simsii HOM05D002826 ORTHO05D003105 5.2e-22 108.2 208 40.4
PSO541G5721 Papaver somniferum HOM05D002826 ORTHO05D003105 6.8e-22 107.8 151 47.7
QL02p013021 Quercus lobata HOM05D002826 ORTHO05D003105 6.8e-22 107.8 168 44.6
Atru.chr13.209 Acer truncatum HOM05D002826 ORTHO05D003105 2.0e-21 106.3 138 49.3
Manes.05G141900 Manihot esculenta HOM05D002826 ORTHO05D003105 2.0e-21 106.3 210 40.0
MELO3C013330.2 Cucumis melo HOM05D002826 ORTHO05D003105 3.4e-21 105.5 146 45.2
THA.LOC104813220 Tarenaya hassleriana HOM05D002826 ORTHO05D003105 3.4e-21 105.5 199 39.2
Actinidia17021 Actinidia chinensis HOM05D002826 ORTHO05D003105 4.4e-21 105.1 214 38.8
Haze_22718 Corylus avellana HOM05D002826 ORTHO05D003105 4.4e-21 105.1 208 40.4
CsaV3_7G001250 Cucumis sativus L. HOM05D002826 ORTHO05D003105 4.4e-21 105.1 146 44.5
Thecc.08G052500 Theobroma cacao HOM05D002826 ORTHO05D003105 4.4e-21 105.1 212 39.6
Duzib116G0507 Durio zibethinus HOM05D002826 ORTHO05D003105 5.7e-21 104.8 210 39.0
Aa31LG9G12360 Aethionema arabicum HOM05D002826 ORTHO05D003105 7.5e-21 104.4 205 39.0
Gohir.D01G095300 Gossypium hirsutum HOM05D002826 ORTHO05D003105 7.5e-21 104.4 207 39.6
Gorai.002G120700 Gossypium raimondii HOM05D002826 ORTHO05D003105 7.5e-21 104.4 207 39.6
Nn1g01623 Nelumbo nucifera HOM05D002826 ORTHO05D003105 7.5e-21 104.4 139 47.5
CiPaw.08G069700 Carya illinoinensis HOM05D002826 ORTHO05D003105 1.3e-20 103.6 203 38.4
ClCG02G003880 Citrullus lanatus HOM05D002826 ORTHO05D003105 1.3e-20 103.6 146 45.2
Ciclev10002475m.g Citrus clementina HOM05D002826 ORTHO05D003105 1.3e-20 103.6 205 40.5
Potri.005G246200 Populus trichocarpa HOM05D002826 ORTHO05D003105 1.3e-20 103.6 202 40.1
Gohir.A01G108700 Gossypium hirsutum HOM05D002826 ORTHO05D003105 1.7e-20 103.2 207 39.6
Potri.002G015900 Populus trichocarpa HOM05D002826 ORTHO05D003105 2.2e-20 102.8 144 46.5
Eucgr.F03705 Eucalyptus grandis HOM05D002826 ORTHO05D003105 2.8e-20 102.4 145 46.2
TWI56G0331 Tripterygium wilfordii HOM05D002826 ORTHO05D003105 3.7e-20 102.1 138 47.8
TAR381G1567 Trochodendron aralioides HOM05D002826 ORTHO05D003105 6.3e-20 101.3 148 46.6
Sabra02G0012700 Salix brachista HOM05D002826 ORTHO05D003105 8.3e-20 100.9 145 46.2
Sabra05G0190300 Salix brachista HOM05D002826 ORTHO05D003105 8.3e-20 100.9 140 46.4
CSS0009204 Camellia sinensis var. sinensis HOM05D002826 ORTHO05D003105 1.1e-19 100.5 224 37.9
Eucgr.I01459 Eucalyptus grandis HOM05D002826 ORTHO05D003105 1.1e-19 100.5 159 41.5
Sed0003034 Sechium edule HOM05D002826 ORTHO05D003105 1.8e-19 99.8 146 43.8
Thhalv10027929m.g Eutrema salsugineum HOM05D002826 ORTHO05D003105 2.4e-19 99.4 170 41.8
MD05G1126400 Malus domestica HOM05D002826 ORTHO05D003105 2.4e-19 99.4 172 40.1
Os06g0724400 Oryza sativa ssp. japonica HOM05D002826 ORTHO05D003105 2.4e-19 99.4 145 47.6
Haze_02092 Corylus avellana HOM05D002826 ORTHO05D003105 4.1e-19 98.6 145 44.1
QL11p052502 Quercus lobata HOM05D002826 ORTHO05D003105 7.0e-19 97.8 146 44.5
Sed0001204 Sechium edule HOM05D002826 ORTHO05D003105 9.1e-19 97.4 151 43.0
Cfa005295 Carpinus fangiana HOM05D002826 ORTHO05D003105 1.2e-18 97.1 145 44.1
Zm00001eb272170 Zea mays HOM05D002826 ORTHO05D003105 1.2e-18 97.1 144 47.2
Ca_03293_v3 Cicer arietinum L. HOM05D002826 ORTHO05D003105 2.7e-18 95.9 154 42.9
PGR142G1133 Punica granatum HOM05D002826 ORTHO05D003105 2.7e-18 95.9 141 43.3
Aqoxy6G01935 Aquilegia oxysepala HOM05D002826 ORTHO05D003105 3.5e-18 95.5 144 44.4
FvH4_2g15740 Fragaria vesca HOM05D002826 ORTHO05D003105 4.5e-18 95.1 147 41.5
FAN24G2039 Fragaria x ananassa HOM05D002826 ORTHO05D003105 4.5e-18 95.1 147 41.5
MD10G1129200 Malus domestica HOM05D002826 ORTHO05D003105 4.5e-18 95.1 147 42.9
Zm00001eb228290 Zea mays HOM05D002826 ORTHO05D003105 4.5e-18 95.1 143 45.5
CANSAT25G1892 Cannabis sativa HOM05D002826 ORTHO05D003105 5.9e-18 94.7 211 35.1
CANSAT25G2885 Cannabis sativa HOM05D002826 ORTHO05D003105 5.9e-18 94.7 211 35.1
Oeu041361.1 Olea europaea HOM05D002826 ORTHO05D003105 5.9e-18 94.7 172 39.5
AT5G27280 Arabidopsis thaliana HOM05D002826 ORTHO05D003105 7.7e-18 94.4 145 44.1
Prupe.8G169800 Prunus persica HOM05D002826 ORTHO05D003105 7.7e-18 94.4 146 41.8
HPP92_014544 Vanilla planifolia HOM05D002236 ORTHO05D002341 7.7e-18 94.4 129 47.3
AUR62012994 Chenopodium quinoa HOM05D002826 ORTHO05D003105 1.3e-17 93.6 162 38.9
BcaC03g16466 Brassica carinata HOM05D002826 ORTHO05D003105 1.7e-17 93.2 196 39.3
C02p42780 Brassica napus HOM05D002826 ORTHO05D003105 1.7e-17 93.2 196 39.3
Glyma.10G283900 Glycine max HOM05D002826 ORTHO05D003105 1.7e-17 93.2 147 42.9
Glyma.20G105800 Glycine max HOM05D002826 ORTHO05D003105 1.7e-17 93.2 147 42.9
BolC2t10314H Brassica oleracea HOM05D002826 ORTHO05D003105 2.9e-17 92.4 193 38.9
RcHm_v2.0_Chr6g0279051 Rosa chinensis HOM05D002826 ORTHO05D003105 2.9e-17 92.4 147 41.5
FAN27G0593 Fragaria x ananassa HOM05D002826 ORTHO05D003105 6.5e-17 91.3 147 41.5
Sp7g08460 Schrenkiella parvula HOM05D002826 ORTHO05D003105 6.5e-17 91.3 204 37.3
TPR.G2417 Trifolium pratense HOM05D002826 ORTHO05D003105 6.5e-17 91.3 154 40.9
FAN15G0661 Fragaria x ananassa HOM05D002826 ORTHO05D003105 8.6e-17 90.9 147 41.5
Ah.01g023310 Amaranthus hybridus HOM05D002826 ORTHO05D003105 1.1e-16 90.5 151 42.4
AUR62010005 Chenopodium quinoa HOM05D002826 ORTHO05D003105 1.1e-16 90.5 137 42.3
FAN20G0297 Fragaria x ananassa HOM05D002236 ORTHO05D002341 1.1e-16 90.5 143 42.0
ATR0661G310 Amborella trichopoda HOM05D002826 ORTHO05D003105 1.5e-16 90.1 178 40.4
AL6G39820 Arabidopsis lyrata HOM05D002826 ORTHO05D003105 1.5e-16 90.1 150 42.0
Duzib093G1699 Durio zibethinus HOM05D002826 ORTHO05D003105 1.5e-16 90.1 158 41.1
Medtr1g112990 Medicago truncatula HOM05D002826 ORTHO05D003105 1.5e-16 90.1 153 39.9
VMungo0720G1494 Vigna mungo HOM05D002826 ORTHO05D003105 1.9e-16 89.7 145 42.8
CARHR185890 Cardamine hirsuta HOM05D002826 ORTHO05D003105 2.5e-16 89.4 132 45.5
EL10Ac9g21332 Beta vulgaris HOM05D002826 ORTHO05D003105 5.5e-16 88.2 162 39.5
Carub.0006s2525 Capsella rubella HOM05D002826 ORTHO05D003105 5.5e-16 88.2 124 44.4
CiPaw.05G085900 Carya illinoinensis HOM05D002826 ORTHO05D003105 5.5e-16 88.2 146 41.1
Phvul.007G017400 Phaseolus vulgaris HOM05D002826 ORTHO05D003105 1.2e-15 87.0 145 41.4
Sc18g0006230 Simmondsia chinensis HOM05D002826 ORTHO05D003105 1.2e-15 87.0 136 40.4
MBI08_g05716_MAGBIO Magnolia biondii HOM05D002826 ORTHO05D003105 1.6e-15 86.7 174 39.1
Lalb_Chr06g0163761 Lupinus albus HOM05D002826 ORTHO05D003105 2.8e-15 85.9 144 40.3
Lj5g0014599 Lotus japonicus HOM05D002826 ORTHO05D003105 3.6e-15 85.5 143 42.0
Psat3g175920 Pisum sativum HOM05D002826 ORTHO05D003105 3.6e-15 85.5 139 39.6
CDE05G2980 Ceratophyllum demersum HOM05D002826 ORTHO05D003105 1.5e-13 80.1 93 49.5
SEGI_27970 Sequoiadendron giganteum HOM05D002826 ORTHO05D003105 5.7e-13 78.2 170 37.6
Hma1.2p1_2322F.1_g319860 Hydrangea macrophylla HOM05D002826 ORTHO05D003105 7.5e-13 77.8 206 36.4
AagrBONN_evm.TU.Sc2ySwM_362.1913 Anthoceros agrestis HOM05D002826 ORTHO05D003105 1.3e-12 77.0 98 48.0
Mapoly0030s0011 Marchantia polymorpha HOM05D002826 ORTHO05D003105 1.3e-12 77.0 134 38.8
Hund06451 Selenicereus undatus HOM05D002826 ORTHO05D003105 1.3e-12 77.0 129 39.5
Pp3c5_3740 Physcomitrium patens HOM05D002826 ORTHO05D003105 1.1e-11 73.9 100 44.0
SMO170G0032 Selaginella moellendorffii HOM05D002826 ORTHO05D003105 2.4e-11 72.8 96 46.9
CBR_g45372 Chara braunii HOM05D002826 ORTHO05D003105 6.1e-07 58.2 31 74.2
Zm00001eb240610 Zea mays HOM05D002826 ORTHO05D003105 1.4e-06 57.0 30 80.0
Zm00001eb059400 Zea mays HOM05D003056 ORTHO05D003422 1.8e-06 56.6 31 80.6


User provided reference genes

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