Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 3.7e-85 318.2 161 100.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 7.3e-65 250.8 160 81.9
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.4e-63 246.5 157 77.1
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.8e-56 222.2 159 73.6
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 8.1e-56 220.7 159 74.2
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 2.4e-55 219.2 136 81.6
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 1.9e-52 209.5 155 68.4
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.9e-52 209.5 136 76.5
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.6e-51 206.5 151 69.5
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 2.7e-51 205.7 154 67.5
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 6.0e-51 204.5 159 67.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 7.9e-51 204.1 155 68.4
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.0e-50 203.8 154 69.5
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.3e-50 203.4 161 64.6
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 3.9e-50 201.8 128 79.7
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 5.1e-50 201.4 160 65.0
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 6.7e-50 201.1 147 72.1
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 8.7e-50 200.7 155 70.3
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.5e-49 199.9 124 79.0
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 2.5e-49 199.1 159 66.0
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 3.3e-49 198.7 124 78.2
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 3.3e-49 198.7 152 67.1
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 5.6e-49 198.0 154 66.2
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 5.6e-49 198.0 161 64.0
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 7.4e-49 197.6 161 64.0
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 9.6e-49 197.2 161 66.5
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 1.3e-48 196.8 130 78.5
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.6e-48 196.4 126 77.0
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 1.6e-48 196.4 161 63.4
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 2.1e-48 196.1 127 75.6
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 3.7e-48 195.3 132 73.5
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 3.7e-48 195.3 128 74.2
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.7e-48 195.3 129 75.2
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 4.8e-48 194.9 154 66.2
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 6.2e-48 194.5 130 76.9
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 6.2e-48 194.5 161 62.7
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 1.4e-47 193.4 159 60.4
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 1.8e-47 193.0 126 74.6
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.8e-47 193.0 127 74.0
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.8e-47 193.0 127 74.8
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 2.4e-47 192.6 130 72.3
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 3.1e-47 192.2 126 73.0
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 4.0e-47 191.8 156 66.0
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 4.0e-47 191.8 128 72.7
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 5.3e-47 191.4 125 75.2
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 9.0e-47 190.7 132 70.5
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.2e-46 190.3 130 75.4
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.5e-46 189.9 127 74.0
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 1.5e-46 189.9 126 73.8
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 2.0e-46 189.5 149 67.8
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.0e-46 189.5 130 70.8
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 2.6e-46 189.1 126 73.0
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 3.4e-46 188.7 155 66.5
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 3.4e-46 188.7 161 62.7
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 4.5e-46 188.3 154 62.3
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 4.5e-46 188.3 160 62.5
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 5.8e-46 188.0 126 75.4
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 7.6e-46 187.6 128 72.7
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 9.9e-46 187.2 153 64.1
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 1.3e-45 186.8 154 64.3
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 1.7e-45 186.4 154 63.6
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.7e-45 186.4 154 63.6
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.2e-45 186.0 153 63.4
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.2e-45 186.0 153 63.4
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 2.9e-45 185.7 153 63.4
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 4.9e-45 184.9 130 70.8
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 4.9e-45 184.9 125 75.2
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 4.9e-45 184.9 127 75.6
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 1.1e-44 183.7 154 64.9
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.1e-44 183.7 153 62.7
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.9e-44 183.0 125 75.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 2.4e-44 182.6 154 62.3
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 2.4e-44 182.6 154 63.6
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 3.2e-44 182.2 159 61.6
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 3.2e-44 182.2 161 60.2
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 4.6e-43 178.3 121 71.1
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 1.0e-42 177.2 134 63.4
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 5.1e-42 174.9 132 67.4
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.1e-41 173.7 123 69.9
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.5e-41 172.6 136 62.5
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 2.5e-41 172.6 160 58.1
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 4.3e-41 171.8 131 64.9
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 4.3e-41 171.8 128 68.8
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 7.4e-41 171.0 116 69.8
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 9.6e-41 170.6 155 60.0
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 1.3e-40 170.2 149 58.4
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 2.1e-40 169.5 154 61.7
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.7e-40 168.7 153 56.9
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.1e-39 167.2 145 63.4
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.4e-39 166.8 125 69.6
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 3.1e-39 165.6 149 56.4
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 9.0e-39 164.1 125 68.8
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.2e-38 163.7 131 61.8
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.2e-38 163.7 125 67.2
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 1.2e-38 163.7 125 68.8
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 4.5e-38 161.8 125 68.0
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 1.7e-37 159.8 133 60.9
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 4.9e-37 158.3 127 63.0
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 4.9e-37 158.3 135 63.0
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 8.4e-37 157.5 126 59.5
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 2.5e-36 156.0 127 62.2
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 4.2e-36 155.2 131 62.6
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 9.3e-36 154.1 125 63.2
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.3e-34 150.2 124 62.1
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 7.4e-33 144.4 135 59.3
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 8.5e-29 131.0 125 51.2
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 2.7e-27 125.9 132 53.0
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.0e-26 124.0 89 70.8
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.3e-26 123.6 132 52.3
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.3e-26 122.9 131 46.6
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.5e-25 120.2 116 53.4
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.3e-24 117.1 106 58.5
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 4.1e-23 112.1 133 44.4
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 4.1e-23 112.1 136 47.1
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 6.5e-21 104.8 123 44.7
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 5.5e-20 101.7 123 49.6
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 3.0e-18 95.9 81 54.3
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 6.7e-18 94.7 122 41.8
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.0e-17 93.2 96 52.1
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 2.0e-17 93.2 89 59.6
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 3.4e-14 82.4 153 37.3
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 4.5e-14 82.0 117 45.3
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 3.9e-10 68.9 63 58.7
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 2.2e-08 63.2 56 60.7


User provided reference genes

Program Settings