Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.8e-301 1038.5 533 100.0
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 4.4e-114 416.0 643 46.8
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.2e-84 318.2 610 42.0
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 2.1e-68 264.2 582 39.3
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 7.8e-55 219.2 680 33.1
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 2.0e-50 204.5 595 32.8
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 9.3e-48 195.7 696 30.3
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.6e-47 194.9 684 31.1
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 5.4e-40 169.9 628 28.7
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 2.3e-38 164.5 606 30.0
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 1.7e-33 148.3 517 32.1
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 6.4e-33 146.4 631 28.1
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 6.4e-33 146.4 630 28.3
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 3.2e-32 144.1 522 30.1
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.2e-32 143.7 523 30.6
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.7e-31 141.0 633 27.5
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 4.6e-31 140.2 645 27.6
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 7.9e-31 139.4 629 27.8
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 3.0e-30 137.5 551 29.0
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 3.0e-30 137.5 555 29.5
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.1e-29 135.6 656 27.3
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.9e-29 134.8 557 29.1
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.8e-28 131.0 718 25.9
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.1e-27 129.0 492 30.1
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 2.4e-27 127.9 664 27.0
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 4.0e-27 127.1 553 29.1
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 4.5e-26 123.6 528 29.7
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 5.8e-26 123.2 562 26.5
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.0e-25 122.5 547 30.5
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.0e-25 122.5 511 29.7
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 2.2e-25 121.3 534 30.1
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 2.9e-25 120.9 555 27.7
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 6.5e-25 119.8 560 28.0
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.4e-24 118.6 570 28.2
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 9.3e-24 115.9 541 29.0
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.2e-23 115.5 471 30.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.6e-23 115.2 512 28.3
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 2.7e-23 114.4 537 28.9
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 6.0e-23 113.2 562 28.1
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 1.0e-22 112.5 556 30.0
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 5.1e-22 110.2 627 27.4
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.1e-21 109.0 522 28.0
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 2.5e-21 107.8 545 29.0
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 4.3e-21 107.1 452 29.0
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 7.4e-21 106.3 221 38.9
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.3e-20 105.5 553 29.1
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.6e-20 105.1 463 29.4
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 3.7e-20 104.0 561 26.7
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 8.2e-20 102.8 187 41.7
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.2e-20 102.8 535 28.6
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-19 102.4 185 39.5
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.1e-19 102.4 555 27.7
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.4e-19 101.3 535 27.7
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 6.9e-19 99.8 535 26.9
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.2e-18 99.0 590 27.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 2.0e-18 98.2 495 26.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 2.6e-18 97.8 463 30.0
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.6e-18 97.8 370 28.9
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 4.5e-18 97.1 464 27.6
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 5.9e-18 96.7 457 27.6
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 5.9e-18 96.7 573 26.0
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 7.6e-18 96.3 539 28.2
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 1.0e-17 95.9 489 28.0
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.0e-17 95.9 492 26.0
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.3e-17 95.5 435 28.3
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 2.2e-17 94.7 513 26.9
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.2e-17 94.7 531 26.4
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 5.0e-17 93.6 440 27.3
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 5.0e-17 93.6 509 27.1
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 6.5e-17 93.2 448 28.1
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 8.4e-17 92.8 455 28.8
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.5e-16 91.3 491 26.3
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 4.2e-16 90.5 499 28.1
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 5.5e-16 90.1 151 41.1
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 7.2e-16 89.7 531 26.2
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 9.3e-16 89.4 518 27.8
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.2e-15 89.0 358 29.3
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.2e-15 89.0 480 27.7
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 1.6e-15 88.6 388 26.3
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 2.1e-15 88.2 553 25.7
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 2.1e-15 88.2 511 27.2
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 3.5e-15 87.4 156 41.7
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 4.6e-15 87.0 505 28.1
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 4.6e-15 87.0 522 26.8
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 6.1e-15 86.7 333 28.5
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 7.9e-15 86.3 501 25.5
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.0e-14 85.9 223 32.7
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 1.0e-14 85.9 196 35.7
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.8e-14 85.1 660 24.4
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 5.1e-14 83.6 529 25.5
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 6.7e-14 83.2 533 24.8
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.1e-13 82.4 469 27.9
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 2.5e-13 81.3 165 37.6
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 9.7e-13 79.3 226 36.3
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 2.2e-12 78.2 187 36.9
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 2.2e-12 78.2 530 25.7
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 1.4e-11 75.5 553 26.4
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 4.1e-11 73.9 546 25.3
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.2e-10 72.4 469 24.9
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 2.0e-10 71.6 156 32.7
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 1.7e-09 68.6 515 25.4
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 2.9e-09 67.8 400 26.0
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 2.9e-09 67.8 357 26.6
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.8e-09 67.4 217 31.8
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 3.8e-09 67.4 471 25.5
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 5.0e-09 67.0 371 27.5
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 1.1e-08 65.9 468 26.7
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.5e-08 64.7 542 24.0
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 5.5e-08 63.5 360 27.2
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 5.1e-06 57.0 93 43.0


User provided reference genes

Program Settings