Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 5.9e-112 407.5 204 100.0
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 7.0e-105 384.0 204 93.6
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 1.4e-81 306.6 198 76.3
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 4.7e-77 291.6 195 72.8
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 8.9e-76 287.3 195 72.3
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 1.5e-75 286.6 192 72.4
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 8.4e-74 280.8 200 70.0
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 2.7e-64 249.2 194 61.9
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 7.9e-64 247.7 194 61.3
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.0e-63 245.7 194 62.4
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 3.9e-63 245.4 194 61.3
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 8.7e-63 244.2 193 60.6
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 1.5e-62 243.4 198 61.6
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 2.5e-62 242.7 194 59.3
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 4.3e-62 241.9 186 62.9
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 4.3e-62 241.9 192 61.5
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 4.3e-62 241.9 192 62.0
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 9.6e-62 240.7 192 60.9
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 1.1e-60 237.3 195 55.4
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 1.4e-60 236.9 192 59.9
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 5.3e-60 235.0 194 59.8
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 5.3e-60 235.0 199 57.8
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 4.5e-59 231.9 198 58.6
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 5.8e-59 231.5 222 53.6
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.3e-58 230.3 195 56.4
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 1.3e-58 230.3 196 57.7
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.7e-58 229.9 195 56.9
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 2.2e-58 229.6 199 57.3
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 2.2e-58 229.6 199 57.8
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 2.9e-58 229.2 192 58.3
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 4.9e-58 228.4 199 57.3
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 6.4e-58 228.0 188 60.1
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 1.1e-57 227.3 196 57.1
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 1.4e-57 226.9 194 58.2
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 1.9e-57 226.5 194 58.2
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 7.1e-57 224.6 195 55.9
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 7.1e-57 224.6 195 55.4
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 2.1e-56 223.0 182 58.8
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 2.1e-56 223.0 214 53.3
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 3.5e-56 222.2 195 56.4
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 1.3e-55 220.3 199 56.8
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.3e-55 220.3 196 55.1
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.3e-55 220.3 194 56.7
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 1.8e-55 219.9 194 52.6
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 2.3e-55 219.5 199 52.3
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 3.0e-55 219.2 194 56.7
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 3.9e-55 218.8 199 52.3
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 3.9e-55 218.8 196 56.1
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 5.1e-55 218.4 199 54.3
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 5.1e-55 218.4 194 55.2
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 6.7e-55 218.0 192 54.7
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 6.7e-55 218.0 192 57.3
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.1e-54 217.2 202 52.5
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.9e-54 216.5 195 52.8
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.9e-54 216.5 195 52.8
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 2.5e-54 216.1 192 55.7
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 2.5e-54 216.1 195 55.9
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 2.5e-54 216.1 195 52.8
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.3e-54 215.3 195 52.3
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 5.6e-54 214.9 179 55.3
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 5.6e-54 214.9 194 55.7
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 9.6e-54 214.2 194 49.0
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 9.6e-54 214.2 195 52.8
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 1.3e-53 213.8 187 57.8
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 1.6e-53 213.4 194 49.5
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 2.1e-53 213.0 202 51.5
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 3.7e-53 212.2 195 53.3
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 3.7e-53 212.2 199 50.8
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 4.8e-53 211.8 151 71.5
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 6.2e-53 211.5 194 48.5
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 1.4e-52 210.3 194 52.1
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 1.4e-52 210.3 194 51.5
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 1.8e-52 209.9 197 53.3
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 2.4e-52 209.5 198 53.5
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 3.1e-52 209.1 196 54.6
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 4.0e-52 208.8 199 50.8
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 4.0e-52 208.8 194 50.5
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 5.3e-52 208.4 195 53.3
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.0e-52 207.6 195 50.8
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 9.0e-52 207.6 194 51.5
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 1.5e-51 206.8 194 52.6
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 1.5e-51 206.8 202 55.0
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 2.0e-51 206.5 208 50.0
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 3.4e-51 205.7 196 54.6
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 4.5e-51 205.3 196 48.0
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 4.5e-51 205.3 196 48.0
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 7.6e-51 204.5 193 54.9
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 7.6e-51 204.5 195 52.8
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.0e-50 204.1 178 55.1
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 1.3e-50 203.8 193 54.4
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 2.2e-50 203.0 196 47.4
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 2.9e-50 202.6 187 49.2
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 3.8e-50 202.2 199 49.2
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 4.9e-50 201.8 187 49.2
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 1.4e-49 200.3 173 57.8
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 4.6e-48 195.3 186 48.4
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 6.0e-48 194.9 166 59.0
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 6.0e-48 194.9 180 53.3
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 6.0e-48 194.9 193 51.3
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 5.1e-47 191.8 221 47.5
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 6.7e-47 191.4 199 49.7
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.1e-46 190.7 176 55.1
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 3.3e-46 189.1 183 53.0
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 4.3e-46 188.7 194 48.5
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 4.3e-46 188.7 199 47.7
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 5.7e-46 188.3 197 47.2
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 2.8e-45 186.0 195 49.2
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.8e-45 186.0 195 49.2
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 4.8e-45 185.3 195 49.2
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 4.8e-45 185.3 152 59.2
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 6.3e-45 184.9 179 52.5
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 1.4e-44 183.7 197 46.7
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 4.1e-44 182.2 126 69.0
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 2.0e-43 179.9 180 48.9
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 2.6e-43 179.5 162 54.3
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 3.4e-43 179.1 213 46.5
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 4.5e-43 178.7 180 49.4
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 5.9e-43 178.3 168 53.6
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 9.3e-41 171.0 218 45.4
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 2.7e-40 169.5 195 47.7
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 5.1e-39 165.2 130 61.5
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 6.7e-39 164.9 159 47.8
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 9.7e-38 161.0 142 54.2
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 6.5e-34 148.3 198 40.4
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 5.5e-33 145.2 207 42.0
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 9.4e-33 144.4 154 46.1
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 1.8e-31 140.2 231 38.1
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 3.0e-31 139.4 207 37.7
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 3.9e-31 139.0 197 40.1
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 3.7e-29 132.5 200 39.0
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 2.0e-27 126.7 199 36.2
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.4e-25 120.6 184 37.0
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.5e-25 119.8 183 36.1
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 4.2e-25 119.0 115 53.0
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 5.2e-23 112.1 194 36.6
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 3.1e-20 102.8 76 65.8
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 2.9e-18 96.3 162 36.4
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.2e-14 84.3 99 45.5
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.3e-13 80.9 88 46.6
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 3.2e-09 66.2 137 32.8
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 9.4e-09 64.7 58 44.8


User provided reference genes

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