Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 3.7e-126 454.9 231 100.0
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 6.3e-102 374.4 226 81.4
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 7.0e-101 370.9 223 81.2
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 9.4e-98 360.5 223 75.3
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 2.3e-96 355.9 223 74.9
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 2.2e-94 349.4 221 75.1
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 3.7e-94 348.6 232 72.8
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.4e-93 346.7 232 72.4
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 1.2e-92 343.6 222 73.0
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 1.6e-92 343.2 229 70.7
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 2.7e-92 342.4 222 72.5
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 4.5e-92 341.7 223 73.1
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 1.3e-91 340.1 223 71.7
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 1.7e-91 339.7 223 76.2
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 2.2e-91 339.3 221 73.3
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 2.9e-91 339.0 224 72.8
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 3.8e-91 338.6 225 71.1
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 3.8e-91 338.6 227 70.0
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 3.8e-91 338.6 224 74.1
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 5.0e-91 338.2 222 73.0
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 5.0e-91 338.2 222 70.3
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 8.5e-91 337.4 224 72.8
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 8.5e-91 337.4 230 70.0
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.1e-90 337.0 224 72.3
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.1e-90 337.0 224 72.3
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 2.5e-90 335.9 224 70.5
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 2.5e-90 335.9 221 69.7
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 3.2e-90 335.5 219 73.5
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 4.2e-90 335.1 222 72.5
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 5.5e-90 334.7 224 69.6
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 5.5e-90 334.7 224 71.0
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 7.2e-90 334.3 223 71.7
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 9.4e-90 334.0 220 72.3
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 1.2e-89 333.6 223 73.1
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 1.6e-89 333.2 221 72.9
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 1.6e-89 333.2 219 71.2
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 1.6e-89 333.2 226 69.0
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 2.1e-89 332.8 227 68.7
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 2.7e-89 332.4 218 75.2
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 2.7e-89 332.4 224 71.0
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 3.6e-89 332.0 226 70.8
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 4.7e-89 331.6 222 70.3
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 6.1e-89 331.3 226 70.8
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 1.0e-88 330.5 225 68.9
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 1.4e-88 330.1 226 70.4
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 1.4e-88 330.1 222 72.1
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 1.8e-88 329.7 220 70.9
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 6.8e-88 327.8 225 69.3
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 6.8e-88 327.8 218 70.6
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 8.8e-88 327.4 223 69.1
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 8.8e-88 327.4 227 67.4
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 2.0e-87 326.2 226 67.7
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 4.4e-87 325.1 226 68.6
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 5.7e-87 324.7 225 70.7
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 7.5e-87 324.3 225 68.0
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 1.3e-86 323.6 223 67.3
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 1.3e-86 323.6 282 62.1
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 1.3e-86 323.6 223 69.5
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 4.8e-86 321.6 225 69.3
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 6.3e-86 321.2 216 71.3
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 1.1e-85 320.5 227 68.3
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 1.8e-85 319.7 224 67.0
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 2.4e-85 319.3 224 68.3
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 3.1e-85 318.9 222 69.4
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 5.4e-85 318.2 221 67.9
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 1.6e-84 316.6 220 70.0
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 2.0e-84 316.2 223 67.7
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 2.0e-84 316.2 221 65.6
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 1.0e-83 313.9 224 68.3
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 1.0e-83 313.9 224 68.3
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 1.7e-83 313.2 224 68.3
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 1.7e-83 313.2 252 61.5
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 1.7e-83 313.2 219 68.5
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 3.8e-83 312.0 226 66.4
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 5.0e-83 311.6 223 65.0
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 5.0e-83 311.6 224 67.9
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 6.5e-83 311.2 199 74.9
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 1.1e-82 310.5 232 69.0
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 7.2e-82 307.8 195 75.4
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 2.1e-81 306.2 224 64.3
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 3.6e-81 305.4 219 69.9
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 8.0e-81 304.3 224 63.8
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 1.4e-80 303.5 224 64.3
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 1.4e-80 303.5 252 60.3
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 2.3e-80 302.8 257 59.5
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 8.9e-80 300.8 224 62.5
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 2.0e-79 299.7 224 64.7
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 3.4e-79 298.9 226 61.5
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 5.7e-79 298.1 189 75.1
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 9.8e-79 297.4 192 72.4
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 3.7e-78 295.4 217 68.2
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 3.7e-78 295.4 223 63.2
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 6.3e-78 294.7 216 65.7
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 6.3e-78 294.7 216 65.7
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 8.3e-78 294.3 224 62.9
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 1.1e-77 293.9 224 61.2
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 7.0e-77 291.2 222 60.8
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 7.0e-77 291.2 222 60.8
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 5.9e-76 288.1 222 59.9
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 5.9e-76 288.1 222 59.9
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 1.7e-75 286.6 222 60.4
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 2.3e-75 286.2 219 61.2
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 5.0e-75 285.0 202 67.8
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 8.6e-75 284.3 226 60.2
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 3.3e-74 282.3 222 59.0
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 4.3e-74 282.0 216 60.2
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 7.3e-74 281.2 219 60.3
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 7.3e-74 281.2 188 71.3
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 9.5e-74 280.8 222 58.6
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 9.5e-74 280.8 220 62.3
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 2.8e-73 279.3 218 59.6
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 1.0e-72 277.3 220 60.0
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 1.0e-72 277.3 220 60.0
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 3.0e-72 275.8 220 59.5
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 3.0e-72 275.8 220 59.5
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 3.0e-72 275.8 220 59.5
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 4.0e-72 275.4 223 60.5
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 8.9e-72 274.2 218 58.7
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 3.4e-71 272.3 219 62.6
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 5.8e-71 271.6 208 63.9
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 1.3e-70 270.4 214 58.9
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 4.1e-69 265.4 192 66.1
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 1.7e-67 260.0 227 55.9
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 1.7e-67 260.0 227 55.9
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 8.0e-65 251.1 231 54.5
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 1.8e-64 250.0 200 58.5
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 4.0e-64 248.8 160 71.2
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 5.8e-63 245.0 188 59.6
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 9.8e-63 244.2 197 55.8
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 9.8e-63 244.2 150 78.0
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 1.1e-61 240.7 157 70.1
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 5.4e-61 238.4 207 58.0
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 7.0e-61 238.0 150 75.3
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 4.3e-58 228.8 242 51.2
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 3.6e-57 225.7 231 51.5
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 1.8e-56 223.4 173 61.3
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 3.2e-53 212.6 176 58.0
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 1.2e-52 210.7 216 47.2
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 1.6e-52 210.3 215 48.8
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 9.5e-50 201.1 216 47.2
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 6.8e-48 194.9 224 48.2
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 7.6e-47 191.4 213 45.5
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 2.2e-46 189.9 152 55.9
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 5.1e-43 178.7 120 66.7
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 9.6e-42 174.5 189 46.6
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 9.6e-42 174.5 120 65.8
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 1.7e-38 163.7 116 68.1
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.4e-32 144.1 124 55.6
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 7.6e-31 138.3 90 72.2
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 3.2e-29 132.9 147 44.9
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 7.9e-28 128.3 86 72.1
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 9.6e-26 121.3 209 35.4
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 4.5e-23 112.5 158 39.9
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 4.5e-23 112.5 158 39.9
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 1.4e-21 107.5 73 67.1
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 2.3e-19 100.1 80 63.8
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 3.0e-19 99.8 65 78.5
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 2.8e-17 93.2 74 56.8
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 2.9e-14 83.2 69 53.6
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.5e-13 80.1 47 72.3
CAN.G1190.2 Capsicum annuum HOM05D001742 ORTHO05D001689 5.3e-08 62.4 220 30.0
arahy.Tifrunner.gnm1.ann1.5FL4AU Arachis hypogaea HOM05D000229 ORTHO05D005305 1.3e-06 57.8 38 63.2
HanXRQChr09g0269551 Helianthus annuus HOM05D004555 ORTHO05D005305 2.9e-06 56.6 60 50.0
Pp3c3_6140 Physcomitrium patens HOM05D001742 ORTHO05D001689 8.5e-06 55.1 208 26.9


User provided reference genes

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