Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00753 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.0e-152 543.5 303 100.0
MSTRG.25190 Avicennia marina HOM05D001749 ORTHO05D001632 1.2e-60 237.7 268 54.1
MSTRG.24281 Avicennia marina HOM05D001749 ORTHO05D001632 5.6e-50 202.2 230 53.5
Oeu030425.2 Olea europaea HOM05D001749 ORTHO05D001632 9.9e-47 191.4 248 49.6
SalBow8G3194 Salvia bowleyana HOM05D001749 ORTHO05D001632 9.9e-47 191.4 245 53.1
SalBow8G4985 Salvia bowleyana HOM05D001749 ORTHO05D001632 9.9e-47 191.4 245 53.1
SGA_v2.0_scaffold201G41384 Striga asiatica HOM05D001749 ORTHO05D001632 2.1e-44 183.7 243 53.5
SGA_v2.0_scaffold328G48815 Striga asiatica HOM05D001749 ORTHO05D001632 3.9e-43 179.5 256 47.3
SGA_v2.0_scaffold11G05819 Striga asiatica HOM05D001749 ORTHO05D001632 7.6e-39 165.2 235 45.1
Oeu063612.1 Olea europaea HOM05D001749 ORTHO05D001632 2.7e-36 156.8 258 41.9
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 2.3e-35 153.7 238 40.8
Solyc04g080640.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 6.7e-35 152.1 261 39.8
Sopen04g034230 Solanum pennellii HOM05D001749 ORTHO05D001632 1.5e-34 151.0 261 39.8
Lj4C36T10 Lonicera japonica HOM05D001749 ORTHO05D001632 1.9e-34 150.6 248 42.7
CAN.G1226.48 Capsicum annuum HOM05D001749 ORTHO05D001632 2.5e-34 150.2 256 38.7
Nitab4.5_0003265g0050 Nicotiana tabacum HOM05D001749 ORTHO05D001632 5.6e-34 149.1 264 41.3
Cc10_g02570 Coffea canephora HOM05D001749 ORTHO05D001632 1.3e-33 147.9 254 40.2
Dinv39444 Davidia involucrata HOM05D001749 ORTHO05D001632 2.1e-33 147.1 241 40.2
Peaxi162Scf00140g00031 Petunia axillaris HOM05D001749 ORTHO05D001632 1.8e-32 144.1 252 38.5
PGSC0003DMG400003697 Solanum tuberosum HOM05D001749 ORTHO05D001632 9.0e-32 141.7 268 38.8
Nitab4.5_0009228g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.0e-30 138.3 272 39.3
Hma1.2p1_0469F.1_g159000 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 4.9e-30 136.0 252 39.7
unitig_578.g16076 Utricularia gibba HOM05D001749 ORTHO05D001632 1.5e-26 124.4 251 33.1
CSS0005210 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 3.3e-26 123.2 229 35.8
unitig_8.g4930 Utricularia gibba HOM05D001749 ORTHO05D001632 6.3e-25 119.0 250 33.6
Nitab4.5_0000746g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 6.9e-24 115.5 263 33.8
Rhsim06G0030100 Rhododendron simsii HOM05D001749 ORTHO05D001632 8.5e-22 108.6 239 36.4
HanXRQChr13g0395401 Helianthus annuus HOM05D001749 ORTHO05D001632 9.4e-21 105.1 253 34.0
Actinidia22524 Actinidia chinensis HOM05D001749 ORTHO05D001632 2.7e-20 103.6 215 32.1
HanXRQChr09g0268971 Helianthus annuus HOM05D001749 ORTHO05D001632 1.0e-19 101.7 267 34.1
Peaxi162Scf00303g00092 Petunia axillaris HOM05D001749 ORTHO05D001632 1.0e-19 101.7 256 32.8
DCAR_013834 Daucus carota HOM05D001749 ORTHO05D001632 1.4e-19 101.3 229 36.7
HanXRQChr04g0103991 Helianthus annuus HOM05D001749 ORTHO05D001632 1.4e-19 101.3 234 32.1
HanXRQChr16g0501491 Helianthus annuus HOM05D001749 ORTHO05D001632 6.7e-19 99.0 236 34.3
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 6.7e-19 99.0 236 33.5
Lsat_1_v5_gn_4_117861 Lactuca sativa HOM05D001749 ORTHO05D001632 1.5e-18 97.8 260 32.7
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 5.7e-18 95.9 246 33.7
Lsat_1_v5_gn_5_27281 Lactuca sativa HOM05D001749 ORTHO05D001632 8.2e-17 92.0 233 31.8
DCAR_022466 Daucus carota HOM05D001749 ORTHO05D001632 1.1e-16 91.7 236 32.2
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 3.1e-16 90.1 243 33.3
ECA232G3131 Erigeron canadensis HOM05D001749 ORTHO05D001632 1.2e-15 88.2 264 35.6
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.2e-15 88.2 250 30.4
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.2e-15 88.2 250 30.4
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 7.7e-15 85.5 249 30.1
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.7e-14 84.3 235 33.2
Sc15g0007080 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.7e-14 84.3 242 33.1
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.9e-14 83.6 237 29.1
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 1.9e-13 80.9 244 26.2
DCAR_025960 Daucus carota HOM05D001749 ORTHO05D001632 2.5e-13 80.5 243 26.7
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 3.2e-13 80.1 247 28.3
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 3.2e-13 80.1 231 29.9
Nitab4.5_0019909g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 7.2e-13 79.0 260 30.4
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 7.2e-13 79.0 251 30.7
FAN19G1879 Fragaria x ananassa HOM05D001749 ORTHO05D001632 9.4e-13 78.6 241 30.3
Sc02g0005800 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.2e-12 78.2 241 31.1
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.6e-12 77.8 252 26.6
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 1.6e-12 77.8 254 30.7
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 2.1e-12 77.4 257 28.4
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 2.1e-12 77.4 231 30.7
FvH4_1g12780 Fragaria vesca HOM05D001749 ORTHO05D001632 2.1e-12 77.4 241 29.9
FAN26G1634 Fragaria x ananassa HOM05D001749 ORTHO05D001632 2.1e-12 77.4 238 29.0
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 2.1e-12 77.4 253 29.2
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 3.6e-12 76.6 224 32.1
PSO675G0347 Papaver somniferum HOM05D001749 ORTHO05D001632 3.6e-12 76.6 251 28.3
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.7e-12 76.3 258 29.1
PSO541G5621 Papaver somniferum HOM05D001749 ORTHO05D001632 6.1e-12 75.9 249 27.3
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 7.9e-12 75.5 248 28.6
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 7.9e-12 75.5 248 28.6
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 7.9e-12 75.5 248 29.0
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 1.4e-11 74.7 243 28.8
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 1.4e-11 74.7 235 27.7
CiPaw.01G045700 Carya illinoinensis HOM05D001749 ORTHO05D001632 3.0e-11 73.6 214 28.5
FAN23G0952 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.9e-11 73.2 239 29.3
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 5.1e-11 72.8 237 29.1
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 5.1e-11 72.8 243 27.6
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 1.1e-10 71.6 235 27.2
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.1e-10 71.6 250 30.8
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.5e-10 71.2 224 29.5
FAN28G1045 Fragaria x ananassa HOM05D001749 ORTHO05D001632 2.6e-10 70.5 241 29.9
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 2.6e-10 70.5 243 27.2
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 3.3e-10 70.1 248 29.0
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 3.3e-10 70.1 233 25.8
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.3e-10 70.1 247 27.9
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 3.3e-10 70.1 253 27.7
ATR0568G223 Amborella trichopoda HOM05D001749 ORTHO05D001632 7.4e-10 68.9 233 27.5
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 7.4e-10 68.9 235 28.1
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 7.4e-10 68.9 254 27.6
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 1.3e-09 68.2 263 33.5
MBI10_g06727_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.3e-09 68.2 255 29.0
RcHm_v2.0_Chr2g0100901 Rosa chinensis HOM05D001749 ORTHO05D001632 1.3e-09 68.2 292 28.4
Sed0016213 Sechium edule HOM05D001749 ORTHO05D001632 1.3e-09 68.2 259 36.3
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 1.3e-09 68.2 227 27.8
Duzib052G0040 Durio zibethinus HOM05D001749 ORTHO05D001632 2.2e-09 67.4 228 28.5
Glyma.11G115300 Glycine max HOM05D001749 ORTHO05D001632 2.2e-09 67.4 255 26.3
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 2.8e-09 67.0 234 28.6
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 6.3e-09 65.9 227 29.5
Glyma.12G041200 Glycine max HOM05D001749 ORTHO05D001632 8.2e-09 65.5 255 27.5
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 8.2e-09 65.5 229 26.2
THA.LOC104819200 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 1.1e-08 65.1 242 26.9
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 1.4e-08 64.7 210 30.0
Oeu041631.1 Olea europaea HOM05D001749 ORTHO05D001632 2.4e-08 63.9 230 27.0
Cc07_g09890 Coffea canephora HOM05D001749 ORTHO05D001632 5.3e-08 62.8 261 28.0
THA.LOC104826664 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 5.3e-08 62.8 240 28.8
Ca_22298_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 9.1e-08 62.0 222 27.0
Ca_22328_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 9.1e-08 62.0 222 27.0
CARHR281310 Cardamine hirsuta HOM05D001749 ORTHO05D001632 1.2e-07 61.6 261 26.4
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.2e-07 61.6 245 26.9
Ciclev10004012m.g Citrus clementina HOM05D009764 ORTHO05D013404 1.5e-07 61.2 241 29.0
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.5e-07 61.2 227 26.0
QL06p047145 Quercus lobata HOM05D001749 ORTHO05D001632 1.5e-07 61.2 217 28.6
Cfa004342 Carpinus fangiana HOM05D001749 ORTHO05D001632 2.6e-07 60.5 216 29.2
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 4.5e-07 59.7 233 27.9
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 4.5e-07 59.7 219 27.9
TPR.G30499 Trifolium pratense HOM05D001749 ORTHO05D001632 5.9e-07 59.3 269 26.0
Glyma.02G054400 Glycine max HOM05D001749 ORTHO05D001632 7.7e-07 58.9 231 30.3
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 7.7e-07 58.9 233 27.9
BcaC07g39561 Brassica carinata HOM05D001749 ORTHO05D001632 2.2e-06 57.4 250 25.2
HanXRQChr11g0325491 Helianthus annuus HOM05D001749 ORTHO05D001632 2.2e-06 57.4 250 25.2
CANSAT11G0884 Cannabis sativa HOM05D001749 ORTHO05D001632 2.9e-06 57.0 257 26.1
Lj1g0015330 Lotus japonicus HOM05D001749 ORTHO05D001632 2.9e-06 57.0 267 25.5
Ah.05g177040 Amaranthus hybridus HOM05D001749 ORTHO05D001632 3.8e-06 56.6 235 26.8
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 3.8e-06 56.6 242 25.6
Migut.N01252 Erythranthe guttata HOM05D001749 ORTHO05D001632 3.8e-06 56.6 229 27.9
Lj4g0011278 Lotus japonicus HOM05D001749 ORTHO05D001632 3.8e-06 56.6 235 27.7
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.0e-06 56.2 230 28.3
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 6.5e-06 55.8 254 26.0
HanXRQChr09g0261391 Helianthus annuus HOM05D001749 ORTHO05D001632 6.5e-06 55.8 252 24.2
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 6.5e-06 55.8 227 26.0
Thhalv10004766m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 8.5e-06 55.5 272 25.0
Prupe.7G158300 Prunus persica HOM05D001749 ORTHO05D001632 8.5e-06 55.5 242 26.9
Sp2g30290 Schrenkiella parvula HOM05D001749 ORTHO05D001632 8.5e-06 55.5 223 26.5


User provided reference genes

Program Settings