Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.2e-194 682.9 338 100.0
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 4.8e-167 591.3 340 85.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.5e-165 586.3 336 85.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.9e-148 528.9 334 75.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.9e-147 526.2 335 75.2
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.4e-142 509.2 334 72.8
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 3.1e-142 508.8 335 73.1
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 9.1e-142 507.3 335 70.4
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 4.5e-141 505.0 335 71.3
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.5e-141 505.0 335 71.6
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 6.5e-140 501.1 335 71.0
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 8.5e-140 500.7 332 71.7
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-139 500.4 335 71.6
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.1e-139 500.4 335 71.3
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 4.2e-139 498.4 335 73.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 4.2e-139 498.4 336 73.8
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 9.4e-139 497.3 335 71.6
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.6e-138 496.5 335 71.6
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.6e-138 496.5 335 71.6
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.1e-138 496.1 335 70.4
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.6e-138 495.4 327 71.9
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 1.4e-137 493.4 332 70.8
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.8e-137 493.0 334 71.3
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.8e-137 493.0 336 71.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 8.8e-137 490.7 338 68.3
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 3.4e-136 488.8 332 70.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 9.8e-136 487.3 332 70.5
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.3e-135 486.9 332 71.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.7e-135 486.5 323 71.2
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.2e-135 486.1 336 69.9
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 6.3e-135 484.6 332 69.6
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.1e-134 483.8 336 70.2
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.8e-134 483.0 334 67.4
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 3.1e-134 482.3 334 70.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 9.1e-134 480.7 335 69.0
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 9.1e-134 480.7 337 68.0
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-133 480.3 333 69.4
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.2e-133 480.3 335 69.9
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.6e-133 479.9 333 70.3
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.6e-133 479.9 322 70.2
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.7e-133 479.2 334 69.8
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 3.5e-133 478.8 333 68.2
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 4.5e-133 478.4 332 70.5
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 5.9e-133 478.0 332 70.5
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 7.7e-133 477.6 332 69.9
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 7.7e-133 477.6 337 68.0
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.2e-132 476.1 337 67.7
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.9e-132 475.7 337 67.7
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.5e-132 474.6 332 70.2
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.1e-131 473.8 335 67.2
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.1e-131 473.8 339 67.3
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.2e-131 472.2 336 70.2
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 9.5e-131 470.7 330 68.5
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.6e-130 468.8 334 67.7
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 6.1e-130 468.0 330 68.5
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 8.0e-130 467.6 335 67.5
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.0e-129 467.2 338 66.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 5.2e-129 464.9 334 67.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 5.2e-129 464.9 333 67.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 8.8e-129 464.2 325 67.1
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.0e-128 463.0 332 66.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 3.4e-128 462.2 331 68.6
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 2.4e-126 456.1 321 67.3
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 5.4e-126 454.9 324 67.3
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-125 453.8 310 69.4
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 7.7e-125 451.1 320 68.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.1e-123 447.2 340 63.8
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.3e-123 445.3 326 65.3
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.3e-123 445.3 326 65.3
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 5.6e-123 444.9 338 66.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 7.3e-123 444.5 322 65.8
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.6e-122 443.4 334 63.5
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.6e-122 443.4 326 65.0
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.6e-122 443.4 326 65.0
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.6e-122 443.4 322 65.5
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.1e-122 443.0 341 63.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.1e-122 443.0 345 62.9
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.7e-122 441.8 338 64.8
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 8.0e-122 441.0 327 64.5
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 3.0e-121 439.1 325 65.5
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 3.4e-120 435.6 337 64.7
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 4.4e-120 435.3 336 63.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 4.4e-120 435.3 331 63.7
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 2.2e-119 433.0 325 65.2
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 2.2e-119 433.0 336 65.8
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 5.6e-115 418.3 342 58.8
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.6e-114 416.8 320 65.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-114 416.8 331 60.7
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.1e-114 416.4 316 63.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.5e-96 357.1 305 57.0
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.0e-96 356.7 310 55.5
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 9.9e-96 354.4 326 55.8
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.1e-94 349.0 296 59.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.8e-88 328.6 206 75.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 5.1e-84 315.5 318 50.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.4e-81 307.4 203 71.9
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 4.5e-80 302.4 309 50.5
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-79 300.4 305 50.5
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-77 293.9 254 57.9
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 5.6e-75 285.4 215 65.6
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.8e-74 283.1 177 74.0
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 8.4e-71 271.6 205 64.4
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.1e-67 261.2 160 76.9
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-60 238.0 165 67.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.3e-57 225.7 257 51.0
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.8e-55 219.5 135 74.8
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.5e-54 216.9 284 43.3
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.7e-51 205.7 157 64.3
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.6e-43 180.3 131 68.7
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-41 174.1 143 62.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.1e-41 172.9 155 54.2
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 3.7e-34 149.8 89 74.2
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.7e-26 124.4 127 52.8
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.2e-24 118.2 108 53.7
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 5.7e-19 99.4 285 29.1
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 9.8e-19 98.6 72 63.9
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.5e-16 90.1 89 55.1
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 3.8e-15 86.7 174 33.3
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 2.2e-10 70.9 151 34.4
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 6.6e-07 59.3 210 28.6
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 5.6e-06 56.2 148 29.7
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 5.6e-06 56.2 184 27.7


User provided reference genes

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