Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 0.0e+00 1404.8 734 100.0
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 9.8e-165 584.7 754 50.0
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 6.8e-134 482.3 778 44.7
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 3.9e-129 466.5 807 42.4
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 1.2e-109 401.7 792 40.0
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.9e-99 367.9 772 38.7
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 1.6e-95 354.8 793 37.1
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 5.8e-93 346.3 784 36.1
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 9.3e-91 339.0 798 36.2
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 2.5e-88 330.9 793 34.7
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 9.6e-88 328.9 790 36.2
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.0e-84 318.9 801 35.7
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 1.0e-84 318.9 801 35.8
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 3.2e-83 313.9 803 35.0
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 2.7e-74 284.3 710 35.9
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 4.3e-72 276.9 713 35.5
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 3.3e-64 250.8 769 31.9
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.7e-63 247.3 779 30.9
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.4e-62 245.4 762 33.1
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 2.4e-62 244.6 822 28.5
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 5.3e-62 243.4 796 31.0
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 4.7e-58 230.3 872 31.5
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.0e-57 229.2 814 30.7
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.0e-57 229.2 784 30.7
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 9.7e-56 222.6 776 30.5
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 9.7e-56 222.6 781 30.5
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 2.2e-55 221.5 790 30.9
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 3.7e-55 220.7 885 27.1
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.1e-54 219.2 775 30.3
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.1e-54 217.2 775 30.2
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 7.0e-54 216.5 276 52.2
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 5.0e-52 210.3 225 54.2
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 6.5e-52 209.9 882 29.4
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 9.4e-51 206.1 435 37.5
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.1e-50 203.4 855 29.1
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 8.0e-50 203.0 850 28.9
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 8.8e-49 199.5 768 29.7
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 9.8e-48 196.1 820 28.2
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 2.2e-47 194.9 273 47.3
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 2.8e-47 194.5 845 28.6
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.8e-47 194.5 723 29.9
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 2.0e-45 188.3 801 29.0
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 2.2e-44 184.9 858 28.9
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 3.8e-44 184.1 836 28.5
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 8.5e-44 183.0 803 27.9
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.5e-43 182.2 951 25.9
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.9e-43 181.8 505 33.9
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 2.5e-43 181.4 469 34.1
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.5e-43 181.4 505 31.9
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 3.2e-43 181.0 801 27.0
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 4.2e-43 180.6 210 51.0
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 5.5e-43 180.3 803 28.9
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 9.5e-43 179.5 579 30.7
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 2.7e-42 177.9 761 28.1
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.6e-42 177.6 332 39.2
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.4e-41 175.6 845 27.1
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 6.8e-41 173.3 811 29.1
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 1.5e-40 172.2 759 28.5
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 2.6e-40 171.4 767 28.8
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 4.4e-40 170.6 402 34.8
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 4.4e-40 170.6 789 26.6
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 9.8e-40 169.5 224 46.4
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.3e-39 169.1 177 52.5
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.7e-39 168.7 814 28.1
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 2.2e-39 168.3 273 40.3
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 6.3e-39 166.8 767 25.9
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 8.3e-39 166.4 322 38.8
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 5.4e-38 163.7 804 25.4
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 7.0e-38 163.3 913 25.6
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 2.0e-37 161.8 268 42.2
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.3e-36 158.3 648 27.9
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 2.9e-36 157.9 506 30.6
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 8.6e-36 156.4 815 26.6
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.6e-34 152.1 844 25.0
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 4.0e-33 147.5 255 38.8
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.5e-32 145.6 257 39.3
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 3.4e-32 144.4 843 26.2
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 7.5e-32 143.3 266 37.2
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 7.5e-32 143.3 266 37.2
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 7.5e-32 143.3 266 37.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.7e-31 142.1 315 35.2
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.7e-31 142.1 315 35.2
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.9e-31 141.4 734 26.8
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 2.4e-30 138.3 771 26.7
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 1.2e-29 136.0 752 26.3
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 3.5e-29 134.4 312 33.7
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 1.7e-28 132.1 312 32.7
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 5.0e-28 130.6 759 23.7
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 5.0e-28 130.6 858 26.1
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 5.0e-28 130.6 501 28.5
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.5e-27 129.0 593 28.7
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.3e-27 127.9 766 25.7
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 3.3e-27 127.9 429 29.6
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 5.6e-27 127.1 759 23.8
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 5.6e-27 127.1 313 32.9
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.2e-26 123.6 477 29.4
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.8e-25 122.1 248 39.1
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.8e-25 122.1 770 24.7
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 2.3e-25 121.7 537 29.4
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 2.3e-25 121.7 427 28.3
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 3.1e-25 121.3 360 32.8
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 5.2e-25 120.6 201 43.8
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 8.9e-25 119.8 818 24.2
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 8.9e-25 119.8 178 46.1
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 7.5e-24 116.7 482 28.6
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.3e-23 115.9 131 48.1
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 4.9e-23 114.0 684 24.9
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 8.3e-23 113.2 194 36.1
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.4e-22 111.7 796 25.0
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.2e-21 109.4 231 38.1
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.6e-21 109.0 655 25.0
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.3e-19 100.9 223 37.7
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 9.5e-19 99.8 462 26.8
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 1.2e-16 92.8 227 32.6
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-11 76.3 155 38.1
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 2.3e-09 68.6 135 34.1
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 7.1e-06 57.0 235 24.7
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 9.2e-06 56.6 288 26.4


User provided reference genes

Program Settings