Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 3.5e-175 618.2 320 100.0
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 6.2e-124 448.0 306 76.1
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 3.5e-111 405.6 350 63.7
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 1.3e-110 403.7 314 71.3
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 3.4e-106 389.0 307 68.4
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 3.8e-105 385.6 313 66.1
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 3.8e-105 385.6 342 62.0
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 8.4e-105 384.4 306 64.7
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 3.5e-103 379.0 300 67.3
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 3.5e-103 379.0 305 64.6
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 6.7e-102 374.8 301 66.1
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 4.3e-101 372.1 280 66.1
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 4.3e-101 372.1 305 63.9
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 9.6e-101 370.9 304 63.5
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 1.6e-100 370.2 256 71.5
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.6e-100 370.2 269 68.4
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 2.1e-100 369.8 305 64.6
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 2.8e-100 369.4 305 63.0
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 2.8e-100 369.4 305 63.0
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 2.8e-100 369.4 284 67.3
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 4.8e-100 368.6 291 65.3
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 4.8e-100 368.6 296 65.2
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 4.8e-100 368.6 319 62.4
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 1.1e-99 367.5 301 64.8
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 1.1e-99 367.5 280 66.4
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.4e-99 367.1 306 64.4
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 1.8e-99 366.7 302 62.3
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 3.1e-99 365.9 298 63.8
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 7.6e-98 361.3 258 69.4
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 7.6e-98 361.3 302 62.6
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 1.7e-97 360.1 305 63.9
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 2.2e-97 359.8 300 61.0
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 2.2e-97 359.8 266 68.4
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 2.2e-97 359.8 302 63.6
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 2.2e-97 359.8 275 68.0
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 3.8e-97 359.0 306 63.7
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 1.9e-96 356.7 311 60.5
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 3.2e-96 355.9 271 64.9
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 3.2e-96 355.9 339 57.5
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 5.5e-96 355.1 301 61.8
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.2e-95 354.0 288 64.6
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 1.2e-95 354.0 259 69.1
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.6e-95 353.6 305 62.6
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 6.1e-95 351.7 253 69.6
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 7.9e-95 351.3 294 63.6
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 7.9e-95 351.3 308 60.1
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 1.0e-94 350.9 297 63.3
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 1.8e-94 350.1 301 62.1
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.3e-94 349.7 307 60.6
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 3.9e-94 349.0 252 67.5
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 7.4e-93 344.7 269 67.7
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.6e-92 343.6 301 60.5
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 2.8e-92 342.8 309 59.2
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 4.8e-92 342.0 294 63.6
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 6.3e-92 341.7 293 63.1
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 2.4e-91 339.7 270 63.0
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 6.9e-91 338.2 283 61.8
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 2.6e-90 336.3 305 59.0
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 4.5e-90 335.5 254 65.0
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 1.3e-89 334.0 239 71.1
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 1.9e-88 330.1 289 60.9
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 7.2e-88 328.2 264 63.3
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 2.7e-87 326.2 259 63.3
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 2.7e-87 326.2 254 63.8
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 4.6e-87 325.5 308 58.4
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 1.0e-86 324.3 247 65.6
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 1.4e-86 323.9 269 64.7
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 1.8e-86 323.6 231 68.8
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 3.0e-86 322.8 262 61.5
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 3.0e-86 322.8 272 60.3
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 3.9e-86 322.4 260 64.2
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 5.1e-86 322.0 254 64.6
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 5.1e-86 322.0 265 63.0
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 5.1e-86 322.0 252 63.5
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 2.6e-85 319.7 262 61.1
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 2.6e-85 319.7 265 63.0
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 5.7e-85 318.5 249 63.9
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 9.7e-85 317.8 262 60.7
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 2.8e-84 316.2 304 57.6
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 2.8e-84 316.2 273 61.5
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 2.8e-84 316.2 315 55.9
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 3.7e-84 315.8 262 60.7
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 4.8e-84 315.5 264 59.8
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 4.1e-83 312.4 261 61.3
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 1.2e-82 310.8 296 56.8
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 1.5e-82 310.5 302 55.0
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 2.0e-82 310.1 236 65.7
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 7.7e-82 308.1 248 63.3
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.7e-81 307.0 235 65.5
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 6.5e-81 305.1 262 59.2
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 2.5e-80 303.1 270 60.4
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 6.1e-79 298.5 359 50.4
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 2.0e-74 283.5 190 71.1
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 3.5e-74 282.7 226 61.1
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 5.9e-74 282.0 425 41.2
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 2.2e-73 280.0 248 55.6
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 4.2e-72 275.8 328 50.6
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 2.0e-69 266.9 280 51.1
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.3e-68 264.2 282 48.9
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 1.1e-67 261.2 186 68.3
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 3.1e-67 259.6 200 60.5
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 4.5e-66 255.8 232 56.5
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 8.0e-63 245.0 253 56.5
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 1.2e-61 241.1 256 53.5
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.2e-61 241.1 197 62.9
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.2e-61 241.1 249 52.6
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 1.5e-61 240.7 213 54.5
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 9.8e-61 238.0 202 67.3
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 2.2e-60 236.9 284 46.8
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 4.8e-60 235.7 309 46.6
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 1.7e-57 227.3 283 45.6
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 2.8e-52 209.9 209 56.5
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 3.7e-52 209.5 247 46.2
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.4e-51 206.8 174 60.3
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 3.1e-51 206.5 142 70.4
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 8.0e-47 191.8 246 44.3
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 2.3e-46 190.3 139 69.1
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 5.2e-46 189.1 119 79.0
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 6.4e-44 182.2 252 40.9
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.5e-40 171.0 207 43.5
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 7.3e-32 142.1 163 46.0
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 3.7e-28 129.8 90 75.6
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 6.4e-20 102.4 83 53.0


User provided reference genes

Program Settings