Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 4.4e-73 277.7 128 100.0
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 1.8e-61 239.2 126 87.3
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 3.0e-61 238.4 126 86.5
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 2.4e-58 228.8 126 81.0
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 3.1e-58 228.4 126 81.0
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 5.8e-57 224.2 126 78.6
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 2.2e-56 222.2 125 78.4
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 2.2e-56 222.2 124 79.8
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 2.9e-56 221.9 126 79.4
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 2.9e-56 221.9 124 80.6
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 2.9e-56 221.9 126 79.4
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 4.9e-56 221.1 126 75.4
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 2.5e-55 218.8 124 79.0
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 5.5e-55 217.6 126 73.8
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 7.1e-55 217.2 126 76.2
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 7.1e-55 217.2 126 75.4
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 2.1e-54 215.7 126 73.8
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 2.1e-54 215.7 126 76.2
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 2.7e-54 215.3 126 73.8
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 2.7e-54 215.3 126 73.0
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 3.5e-54 214.9 126 73.8
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 6.0e-54 214.2 125 76.8
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 7.9e-54 213.8 125 76.0
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 1.0e-53 213.4 126 77.0
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 2.3e-53 212.2 126 76.2
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 2.3e-53 212.2 126 76.2
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 2.3e-53 212.2 122 77.9
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 3.0e-53 211.8 126 72.2
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 3.9e-53 211.5 124 75.8
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 3.9e-53 211.5 124 75.8
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 3.9e-53 211.5 125 73.6
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 5.1e-53 211.1 124 75.0
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 5.1e-53 211.1 125 75.2
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 6.7e-53 210.7 111 85.6
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 6.7e-53 210.7 124 75.0
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 6.7e-53 210.7 126 75.4
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 8.7e-53 210.3 126 72.2
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 8.7e-53 210.3 126 73.0
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 1.1e-52 209.9 124 74.2
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 1.5e-52 209.5 125 74.4
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 1.5e-52 209.5 124 75.0
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 1.5e-52 209.5 126 73.0
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 1.9e-52 209.1 124 75.0
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 1.9e-52 209.1 125 75.2
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 2.5e-52 208.8 124 75.8
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 3.3e-52 208.4 126 72.2
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 3.3e-52 208.4 123 75.6
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 3.3e-52 208.4 124 75.8
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 4.3e-52 208.0 124 74.2
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 5.7e-52 207.6 126 74.6
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 5.7e-52 207.6 126 71.4
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 7.4e-52 207.2 124 73.4
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 9.6e-52 206.8 124 72.6
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.3e-51 206.5 126 72.2
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 1.6e-51 206.1 126 71.4
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 1.6e-51 206.1 126 73.0
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.7e-51 204.9 126 70.6
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 3.7e-51 204.9 124 73.4
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 3.7e-51 204.9 124 73.4
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 4.8e-51 204.5 125 72.8
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 4.8e-51 204.5 122 76.2
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 6.2e-51 204.1 124 73.4
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 8.2e-51 203.8 123 74.0
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 1.1e-50 203.4 124 71.8
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 1.4e-50 203.0 126 70.6
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 1.4e-50 203.0 126 70.6
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 2.4e-50 202.2 113 77.9
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 4.1e-50 201.4 126 71.4
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 6.9e-50 200.7 126 69.8
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 6.9e-50 200.7 126 69.8
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 1.2e-49 199.9 118 72.0
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 1.5e-49 199.5 120 73.3
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 2.0e-49 199.1 120 73.3
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 3.4e-49 198.4 122 73.0
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 5.8e-49 197.6 126 68.3
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 8.4e-48 193.7 112 75.9
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 1.4e-47 193.0 126 65.9
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 3.2e-47 191.8 121 70.2
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 5.5e-47 191.0 108 77.8
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 7.1e-47 190.7 110 76.4
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 7.1e-47 190.7 123 69.1
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 7.9e-46 187.2 126 63.5
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 1.0e-45 186.8 105 76.2
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 1.3e-45 186.4 108 75.9
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 1.8e-45 186.0 121 71.1
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 5.1e-45 184.5 105 76.2
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 6.7e-45 184.1 105 76.2
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 8.7e-45 183.7 143 62.2
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 6.3e-43 177.6 103 75.7
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 2.4e-42 175.6 99 77.8
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 7.7e-41 170.6 99 74.7
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 2.7e-38 162.2 116 62.1
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 1.0e-37 160.2 118 61.0
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 7.4e-36 154.1 116 59.5
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 8.2e-35 150.6 90 74.4
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 4.5e-33 144.8 121 51.2
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.3e-32 143.3 120 55.0
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.2e-30 136.7 120 53.3
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 7.9e-30 134.0 116 53.4
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 2.0e-28 129.4 77 71.4
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 3.3e-20 102.1 113 40.7
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 3.2e-15 85.5 101 43.6
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 3.1e-10 68.9 128 31.2
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 7.0e-10 67.8 108 33.3
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 1.2e-09 67.0 126 31.7
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 1.6e-09 66.6 88 34.1
SMO119G0032 Selaginella moellendorffii HOM05D003340 ORTHO05D003775 4.5e-09 65.1 84 35.7
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 5.9e-09 64.7 89 39.3
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 5.9e-09 64.7 89 39.3
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 5.9e-09 64.7 87 33.3
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 5.9e-09 64.7 85 32.9
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 1.0e-08 63.9 111 29.7
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 1.0e-08 63.9 107 29.9
AagrBONN_evm.TU.Sc2ySwM_362.2682 Anthoceros agrestis HOM05D003340 ORTHO05D003775 1.3e-08 63.5 86 30.2
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 1.3e-08 63.5 127 32.3
Peaxi162Scf00079g00248 Petunia axillaris HOM05D003340 ORTHO05D003775 1.3e-08 63.5 124 30.6
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.7e-08 63.2 87 35.6
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 1.7e-08 63.2 87 35.6
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 1.7e-08 63.2 84 35.7
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.2e-08 62.8 107 31.8
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 2.2e-08 62.8 126 30.2
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 2.9e-08 62.4 84 32.1
Gohir.A01G189000 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.9e-08 62.4 126 30.2
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 2.9e-08 62.4 87 33.3
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 2.9e-08 62.4 89 37.1
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 2.9e-08 62.4 87 36.8
VMungo1309G0419 Vigna mungo HOM05D003340 ORTHO05D003775 2.9e-08 62.4 128 30.5
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 5.0e-08 61.6 89 37.1
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 5.0e-08 61.6 126 31.0
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 5.0e-08 61.6 93 33.3
Phvul.009G125000 Phaseolus vulgaris HOM05D003340 ORTHO05D003775 8.5e-08 60.8 128 28.9
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 8.5e-08 60.8 86 30.2
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 8.5e-08 60.8 87 35.6
Gohir.D01G180500 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.1e-07 60.5 126 29.4
Gorai.002G222100 Gossypium raimondii HOM05D003340 ORTHO05D003775 1.1e-07 60.5 126 29.4
Oeu059436.2 Olea europaea HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 33.3
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 35.6
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 1.5e-07 60.1 87 34.5
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 1.5e-07 60.1 123 28.5
Duzib093G0952 Durio zibethinus HOM05D003340 ORTHO05D003775 1.9e-07 59.7 104 31.7
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 34.5
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 1.9e-07 59.7 97 34.0
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 2.5e-07 59.3 84 31.0
Gohir.A06G044800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 2.5e-07 59.3 87 33.3
Lalb_Chr10g0101671 Lupinus albus HOM05D003340 ORTHO05D003775 2.5e-07 59.3 127 28.3
Manes.13G057400 Manihot esculenta HOM05D003340 ORTHO05D003775 2.5e-07 59.3 91 35.2
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 2.5e-07 59.3 82 35.4
Glyma.13G079000 Glycine max HOM05D003340 ORTHO05D003775 3.2e-07 58.9 127 29.1
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 3.2e-07 58.9 87 31.0
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 4.2e-07 58.5 125 30.4
CAN.G264.5 Capsicum annuum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 85 35.3
Gorai.009G283300 Gossypium raimondii HOM05D003340 ORTHO05D003775 4.2e-07 58.5 87 33.3
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 4.2e-07 58.5 87 33.3
PSO170G4666 Papaver somniferum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 126 29.4
Psat6g041160 Pisum sativum HOM05D003340 ORTHO05D003775 4.2e-07 58.5 126 27.8
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 5.5e-07 58.2 86 31.4
COL.COLO4_36312 Corchorus olitorius HOM05D003340 ORTHO05D003775 5.5e-07 58.2 87 33.3
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 5.5e-07 58.2 86 32.6
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 5.5e-07 58.2 128 27.3
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 5.5e-07 58.2 88 31.8
Gohir.D06G045300 Gossypium hirsutum HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 33.3
Gorai.010G050300 Gossypium raimondii HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 33.3
Potri.002G083600 Populus trichocarpa HOM05D003340 ORTHO05D003775 7.2e-07 57.8 125 30.4
Ah.05g171100 Amaranthus hybridus HOM05D005358 ORTHO05D006384 9.4e-07 57.4 86 34.9
Gohir.D05G270700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 9.4e-07 57.4 87 32.2
TWI32G0782 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 9.4e-07 57.4 87 33.3
MD08G1162700 Malus domestica HOM05D003340 ORTHO05D003775 1.2e-06 57.0 88 31.8
PGSC0003DMG400006659 Solanum tuberosum HOM05D003340 ORTHO05D003775 1.2e-06 57.0 85 34.1
Atru.chr13.1461 Acer truncatum HOM05D003340 ORTHO05D003775 1.6e-06 56.6 87 33.3
Dinv07260 Davidia involucrata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 82 31.7
Migut.N00692 Erythranthe guttata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 91 34.1
Nn3g19971 Nelumbo nucifera HOM05D003340 ORTHO05D003775 1.6e-06 56.6 62 35.5
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 87 33.3
Migut.C01126 Erythranthe guttata HOM05D003340 ORTHO05D003775 2.1e-06 56.2 99 30.3
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 2.1e-06 56.2 88 33.0
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 2.1e-06 56.2 97 34.0
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 2.1e-06 56.2 90 31.1
SGA_v2.0_scaffold120G33021 Striga asiatica HOM05D003340 ORTHO05D003775 2.1e-06 56.2 91 34.1
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 2.1e-06 56.2 90 32.2
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 2.7e-06 55.8 98 29.6
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 2.7e-06 55.8 88 33.0
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 2.7e-06 55.8 84 31.0
MD15G1348300 Malus domestica HOM05D003340 ORTHO05D003775 4.7e-06 55.1 88 31.8
Medtr1g030060 Medicago truncatula HOM05D003340 ORTHO05D003775 4.7e-06 55.1 125 28.0
Sabra02G0065600 Salix brachista HOM05D003340 ORTHO05D003775 4.7e-06 55.1 87 33.3
VMungo0647G0885 Vigna mungo HOM05D000654 ORTHO05D002330 4.7e-06 55.1 125 28.0
Gohir.A11G144700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 8.0e-06 54.3 91 35.2


User provided reference genes

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