Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00503 Erythranthe guttata HOM05D009483 ORTHO05D010434 2.5e-23 112.1 98 100.0
MSTRG.22230 Avicennia marina HOM05D009483 ORTHO05D010434 1.3e-11 73.2 92 82.6
SalBow7G2448 Salvia bowleyana HOM05D009483 ORTHO05D010434 7.0e-10 67.4 89 76.4
Nitab4.5_0000934g0160 Nicotiana tabacum HOM05D009483 ORTHO05D010434 6.5e-08 60.8 99 71.7
Nitab4.5_0004707g0020 Nicotiana tabacum HOM05D009483 ORTHO05D010434 6.5e-08 60.8 99 71.7
FAN20G3183 Fragaria x ananassa HOM05D017249 ORTHO05D010434 2.5e-07 58.9 83 77.1
FAN24G2443 Fragaria x ananassa HOM05D017249 ORTHO05D010434 2.5e-07 58.9 83 79.5
Prupe.1G426000 Prunus persica HOM05D017249 ORTHO05D010434 5.5e-07 57.8 98 71.4
CAN.G1054.20 Capsicum annuum HOM05D009483 ORTHO05D010434 7.2e-07 57.4 99 70.7
GSVIVG01009377001 Vitis vinifera HOM05D009483 ORTHO05D010434 9.4e-07 57.0 83 83.1
RcHm_v2.0_Chr6g0309211 Rosa chinensis HOM05D017249 ORTHO05D010434 1.2e-06 56.6 81 81.5
PGSC0003DMG400021535 Solanum tuberosum HOM05D009483 ORTHO05D010434 1.2e-06 56.6 99 69.7
Medtr3g102780 Medicago truncatula HOM05D000634 ORTHO05D010557 2.1e-06 55.8 90 78.9
MD08G1088300 Malus domestica HOM05D017249 ORTHO05D010434 2.7e-06 55.5 76 80.3
CSS0042505 Camellia sinensis var. sinensis HOM05D009483 ORTHO05D010434 6.1e-06 54.3 90 72.2


User provided reference genes

Program Settings