Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.2e-227 790.4 386 100.0
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.0e-73 278.9 449 41.2
Migut.K00647 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.6e-54 217.6 398 39.4
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.2e-50 202.2 419 34.8
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-48 198.0 399 33.6
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-48 198.0 409 34.7
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-47 193.4 408 33.8
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.3e-47 193.0 433 33.0
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 4.3e-47 193.0 411 33.3
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.7e-47 192.6 400 34.2
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 9.7e-47 191.8 414 32.9
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 9.7e-47 191.8 414 32.9
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 5.3e-45 186.0 387 34.4
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-44 184.9 411 32.6
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.5e-44 184.5 417 32.9
Migut.H00781 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.5e-44 183.0 323 40.9
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 4.5e-44 183.0 410 32.7
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-43 179.1 398 32.4
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.9e-42 177.6 378 32.3
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.2e-42 176.8 423 31.7
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.7e-41 173.7 408 30.6
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-41 173.7 416 31.5
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 1.0e-40 171.8 425 30.8
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 5.1e-40 169.5 397 32.0
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.7e-40 169.1 416 32.7
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 6.7e-40 169.1 403 32.8
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-39 167.2 378 28.8
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-39 166.8 426 31.9
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-39 166.8 385 33.5
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-39 166.8 430 31.2
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 5.7e-39 166.0 377 29.7
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.7e-38 164.5 391 30.7
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-38 164.1 415 27.7
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 3.7e-38 163.3 425 31.3
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 4.8e-38 162.9 401 29.9
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 4.8e-38 162.9 396 33.3
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 2.0e-36 157.5 423 31.2
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-34 151.4 374 28.3
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 9.4e-34 148.7 364 31.9
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-33 147.9 393 32.1
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-33 147.1 415 27.2
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 8.0e-33 145.6 401 29.9
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 1.8e-32 144.4 334 30.5
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.7e-31 139.4 405 29.4
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 9.1e-29 132.1 395 26.8
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.2e-28 131.7 357 28.3
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 3.5e-28 130.2 400 27.0
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-27 127.9 405 27.7
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 5.0e-27 126.3 476 26.7
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 5.0e-27 126.3 297 31.0
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-27 125.9 394 28.9
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-26 124.0 380 27.1
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-26 124.0 476 26.5
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 9.4e-26 122.1 396 27.0
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 1.4e-24 118.2 428 26.9
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-23 115.2 310 27.4
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-23 113.6 240 31.2
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 5.7e-23 112.8 229 33.2
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.1e-21 108.6 225 30.2
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 2.4e-21 107.5 252 28.2
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-19 101.3 287 25.8
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 5.0e-19 99.8 386 25.9
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.0e-19 99.8 232 32.8
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-19 99.4 252 30.6
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 3.2e-18 97.1 398 25.9
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-17 95.1 330 27.9
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-17 94.7 400 24.8
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 2.7e-17 94.0 398 26.1
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-17 93.6 210 29.5
RcHm_v2.0_Chr3g0452431 Rosa chinensis HOM05D000151 ORTHO05D000074 8.8e-16 89.0 407 25.1
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 8.8e-16 89.0 171 33.3
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-15 88.6 164 35.4
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 1.5e-15 88.2 418 23.0
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 9.8e-15 85.5 400 27.0
Lj4C37G10 Lonicera japonica HOM05D000151 ORTHO05D000074 1.3e-14 85.1 396 22.7
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 1.7e-14 84.7 386 24.1
Haze_02452 Corylus avellana HOM05D000151 ORTHO05D000074 2.8e-14 84.0 409 25.7
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 2.8e-14 84.0 392 26.3
CAN.G395.31 Capsicum annuum HOM05D013589 ORTHO05D009136 8.3e-14 82.4 314 27.1
Migut.G00592 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.4e-13 81.6 363 26.2
SGA_v2.0_scaffold79G25502 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-13 81.6 252 29.0
SGA_v2.0_scaffold9G05056 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-13 81.6 212 31.1
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 5.4e-13 79.7 288 24.7
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 9.1e-13 79.0 411 25.5
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 9.1e-13 79.0 151 31.1
Dinv22135 Davidia involucrata HOM05D007685 ORTHO05D009136 1.2e-12 78.6 396 25.3
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-12 78.2 106 38.7
Ciclev10006417m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.0e-12 77.8 293 25.3
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-12 77.4 459 25.5
Migut.B00574 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.9e-12 76.3 108 39.8
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 7.7e-12 75.9 406 26.1
CAN.G861.25 Capsicum annuum HOM05D013589 ORTHO05D009136 1.0e-11 75.5 338 25.4
SGA_v2.0_scaffold106G30572 Striga asiatica HOM05D000403 ORTHO05D009136 1.0e-11 75.5 212 29.7
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 1.0e-11 75.5 156 34.0
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-11 75.1 139 36.7
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-11 75.1 105 42.9
Potri.004G134900 Populus trichocarpa HOM05D000151 ORTHO05D000074 5.0e-11 73.2 394 23.4
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 6.6e-11 72.8 409 26.2
Cfa001991 Carpinus fangiana HOM05D000151 ORTHO05D000074 6.6e-11 72.8 406 24.9
arahy.Tifrunner.gnm1.ann1.S5CNIB Arachis hypogaea HOM05D000151 ORTHO05D000074 1.5e-10 71.6 381 24.1
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.5e-10 71.6 410 26.1
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 1.5e-10 71.6 306 25.2
arahy.Tifrunner.gnm1.ann1.U0YPSU Arachis hypogaea HOM05D000151 ORTHO05D000074 1.9e-10 71.2 395 24.6
Haze_16880 Corylus avellana HOM05D000151 ORTHO05D000074 2.5e-10 70.9 408 24.8
Prupe.1G228000 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-10 70.9 359 25.1
arahy.Tifrunner.gnm1.ann1.SZA14E Arachis hypogaea HOM05D000151 ORTHO05D000074 3.3e-10 70.5 394 23.9
Cfa001654 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.3e-10 70.5 397 23.9
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 3.3e-10 70.5 267 24.0
arahy.Tifrunner.gnm1.ann1.QH76HY Arachis hypogaea HOM05D000151 ORTHO05D000074 4.2e-10 70.1 383 24.0
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 4.2e-10 70.1 309 24.3
CAN.G206.109 Capsicum annuum HOM05D000635 ORTHO05D000488 4.2e-10 70.1 267 25.8
Dinv27123 Davidia involucrata HOM05D000151 ORTHO05D000074 4.2e-10 70.1 362 26.2
RcHm_v2.0_Chr5g0032221 Rosa chinensis HOM05D000151 ORTHO05D000074 4.2e-10 70.1 261 24.1
arahy.Tifrunner.gnm1.ann1.EK4ZNN Arachis hypogaea HOM05D000151 ORTHO05D000074 9.5e-10 68.9 357 25.2
arahy.Tifrunner.gnm1.ann1.K2BGZI Arachis hypogaea HOM05D000151 ORTHO05D000074 1.2e-09 68.6 341 24.3
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.2e-09 68.6 416 22.6
FAN28G0096 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-09 68.2 392 23.5
Oeu016486.1 Olea europaea HOM05D000151 ORTHO05D000074 1.6e-09 68.2 394 25.1
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 1.6e-09 68.2 347 24.5
CAN.G1203.1 Capsicum annuum HOM05D013589 ORTHO05D009136 2.1e-09 67.8 467 20.3
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 2.8e-09 67.4 246 25.2
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-09 67.0 102 36.3
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-09 67.0 127 32.3
arahy.Tifrunner.gnm1.ann1.AQ7QDK Arachis hypogaea HOM05D000151 ORTHO05D000074 4.7e-09 66.6 359 24.0
RcHm_v2.0_Chr5g0032171 Rosa chinensis HOM05D000151 ORTHO05D000074 6.1e-09 66.2 267 24.7
SGA_v2.0_scaffold110G31308 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-09 66.2 103 37.9
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.4e-08 65.1 365 23.3
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 1.4e-08 65.1 266 26.7
Cfa003245 Carpinus fangiana HOM05D015779 ORTHO05D000074 1.8e-08 64.7 247 26.7
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 1.8e-08 64.7 89 42.7
Cfa003248 Carpinus fangiana HOM05D015779 ORTHO05D000074 2.3e-08 64.3 246 26.8
Lj5g0028068 Lotus japonicus HOM05D000151 ORTHO05D000074 2.3e-08 64.3 356 24.4
Psat0s2366g0040 Pisum sativum HOM05D000151 ORTHO05D000074 2.3e-08 64.3 398 22.4
SGA_v2.0_scaffold10G05459 Striga asiatica HOM05D007685 ORTHO05D009136 2.3e-08 64.3 172 27.9
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-08 63.9 407 25.3
Rhsim04G0081100 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.0e-08 63.5 368 23.9
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 5.2e-08 63.2 362 22.9
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.2e-08 63.2 372 23.4
Peaxi162Scf00074g00438 Petunia axillaris HOM05D000151 ORTHO05D000074 1.2e-07 62.0 370 24.1
Haze_16879 Corylus avellana HOM05D000151 ORTHO05D000074 1.5e-07 61.6 378 23.5
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 1.5e-07 61.6 342 23.4
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-07 61.6 394 23.9
COL.COLO4_36113 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.4e-07 60.1 331 22.4
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.4e-07 60.1 379 24.3
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.8e-07 58.9 375 24.0
Lj5g0007991 Lotus japonicus HOM05D000151 ORTHO05D000074 1.3e-06 58.5 353 24.1
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-06 58.5 375 24.0
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 4.9e-06 56.6 391 22.0
MD13G1117600 Malus domestica HOM05D000151 ORTHO05D000074 4.9e-06 56.6 349 23.5
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 6.3e-06 56.2 255 25.5
RcHm_v2.0_Chr4g0430571 Rosa chinensis HOM05D014495 ORTHO05D014615 8.3e-06 55.8 207 27.5


User provided reference genes

Program Settings